Find biomarkers in two-class discrimination problems


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Documentation for package ‘BioMark’ version 0.2.6

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AUC ROC curves
gen.data Simulate data sets
get.biom Get biomarkers discriminating between two classes
get.segments Crossvalidation segments
identify.ROC ROC curves
lines.ROC ROC curves
pclda.biom Get biomarkers discriminating between two classes
pclda.coef Get biomarkers discriminating between two classes
plot.ROC ROC curves
plsda.biom Get biomarkers discriminating between two classes
plsda.coef Get biomarkers discriminating between two classes
points.ROC ROC curves
print.ROC ROC curves
ROC ROC curves
ROC.default ROC curves
roc.value ROC curves
scalefun Different forms of scaling
shrinkt.biom Get biomarkers discriminating between two classes
shrinkt.coef Get biomarkers discriminating between two classes
spikedApples Metabolomics data on spiked apples
studentt.biom Get biomarkers discriminating between two classes
studentt.coef Get biomarkers discriminating between two classes
studentt.fun Get biomarkers discriminating between two classes
vip.biom Get biomarkers discriminating between two classes
vip.coef Get biomarkers discriminating between two classes