Tools for mapping of quantitative traits of genetically related individuals and calculating identity coefficients from a pedigree

Documentation for package ‘QTLRel’ version 0.2-4

aicVC	AIC Model Selection
blup	Best Linear Unbiased Prediction
cic	Calculate Jacquard condensed identity coefficients
estVC	Estimate Variance Component Parameters
fv	A collection of other functions.
gdat	Pedigree, genotype data and genetic map.
genMap	Pedigree, genotype data and genetic map.
genMapF34	Pedigree, genotype data and genetic map.
genMatrix	Derive genetic matrices
genoImpute	Impute Genotypic Data
genoPos	A collection of other functions.
genoProb	Probability of a Genotype.
genoSim	Generate Genotypic Data
gvar	A collection of other functions.
hapSim	Generate Genotypic Data
kinship	Calculate kinship coefficients
lodci	Estimate LOD Support Intervals
mAIC	Multiple QTL AIC
mAIC.HK	Multiple QTL AIC
miscEx	Pedigree, genotype data and genetic map.
nullSim	Simulate null distribution
ped	Pedigree, genotype data and genetic map.
pedRecode	Recode a Pedigree
pkolm	A collection of other functions.
plot	Plotting
plot.scanOne	Plotting
plotit	Plotting
qkolm	A collection of other functions.
qqPlot	Quantile-Quantile Plots
qtlVar	QTL Variance
rem	Random effect matrices
scanOne	Genome Scan
v	Pedigree, genotype data and genetic map.
x	Pedigree, genotype data and genetic map.
y	Pedigree, genotype data and genetic map.