* using log directory 'd:/Rcompile/CRANpkg/local/2.11/DEMEtics.Rcheck' * using R version 2.11.1 Patched (2010-07-29 r52657) * using session charset: ISO8859-1 * checking for file 'DEMEtics/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'DEMEtics' version '0.8-3' * checking package name space information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'DEMEtics' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking whether the name space can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE Bootstrapping.CI: no visible binding for global variable 'allelefrequency' Bootstrapping.CI: no visible binding for global variable 'sample.sizes' Bootstrapping.CI: no visible binding for global variable 'values' Bootstrapping.CI: no visible binding for global variable 'HWE' Bootstrapping.p: no visible binding for global variable 'allelefrequency' Bootstrapping.p: no visible binding for global variable 'sample.sizes' Bootstrapping.p: no visible binding for global variable 'values' Bootstrapping.p: no visible binding for global variable 'HWE' D.Jost: no visible binding for global variable 'List' Gst.Nei: no visible binding for global variable 'List' H.out: no visible binding for global variable 'allelefrequency' H.out: no visible binding for global variable 'sample.sizes' H.out: no visible binding for global variable 'v' H.out: no visible binding for global variable 'h' allelefreq: no visible binding for global variable 'allele' over.all.pops: no visible binding for global variable 'allelefrequency' over.all.pops: no visible binding for global variable 'sample.sizes' over.all.pops: no visible binding for global variable 'values' over.all.pops: no visible binding for global variable 'p.value' over.all.pops: no visible binding for global variable 'means' over.all.pops: no visible binding for global variable 'confidence.limits' pair.pops: no visible binding for global variable 'allelefrequency' pair.pops: no visible binding for global variable 'sample.sizes' pair.pops: no visible binding for global variable 'values' pair.pops: no visible binding for global variable 'loci' pair.pops: no visible binding for global variable 'means' pair.pops: no visible binding for global variable 'Dv.pairwise.adjusted' pair.pops: no visible binding for global variable 'confidence.limits' * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking data for non-ASCII characters ... OK * checking examples ... OK * checking PDF version of manual ... OK