* using log directory 'd:/Rcompile/CRANpkg/local/2.11/pROC.Rcheck' * using R version 2.11.1 Patched (2010-07-29 r52657) * using session charset: ISO8859-1 * checking for file 'pROC/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'pROC' version '1.4.3' * package encoding: UTF-8 * checking package name space information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'pROC' can be installed ... WARNING Found the following significant warnings: Warning: ./man/aSAH.Rd:23: unknown macro '\href' Warning: ./man/aSAH.Rd:41: unknown macro '\href' Warning: ./man/auc.Rd:124: unknown macro '\href' Warning: ./man/auc.Rd:129: unknown macro '\href' Warning: ./man/auc.Rd:133: unknown macro '\href' Warning: ./man/auc.Rd:138: unknown macro '\href' Warning: ./man/ci.Rd:71: unknown macro '\href' Warning: ./man/ci.auc.Rd:190: unknown macro '\href' Warning: ./man/ci.se.Rd:128: unknown macro '\href' Warning: ./man/ci.se.Rd:137: unknown macro '\href' Warning: ./man/ci.sp.Rd:128: unknown macro '\href' Warning: ./man/ci.sp.Rd:137: unknown macro '\href' Warning: ./man/ci.thresholds.Rd:120: unknown macro '\href' Warning: ./man/ci.thresholds.Rd:129: unknown macro '\href' Warning: ./man/coords.Rd:188: unknown macro '\href' Warning: ./man/coords.Rd:193: unknown macro '\href' Warning: ./man/multiclass.Rd:90: unknown macro '\href' Warning: ./man/pROC-package.Rd:40: unknown macro '\href' Warning: ./man/pROC-package.Rd:138: unknown macro '\href' Warning: ./man/pROC-package.Rd:143: unknown macro '\href' Warning: ./man/plot.ci.Rd:75: unknown macro '\href' Warning: ./man/plot.roc.Rd:276: unknown macro '\href' Warning: ./man/roc.Rd:225: unknown macro '\href' Warning: ./man/roc.Rd:230: unknown macro '\href' Warning: ./man/roc.test.Rd:344: unknown macro '\href' Warning: ./man/roc.test.Rd:349: unknown macro '\href' Warning: ./man/roc.test.Rd:353: unknown macro '\href' Warning: ./man/smooth.roc.Rd:225: unknown macro '\href' Warning: ./man/smooth.roc.Rd:231: unknown macro '\href' See 'd:/Rcompile/CRANpkg/local/2.11/pROC.Rcheck/00install.out' for details. * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking whether the name space can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... WARNING prepare_Rd: aSAH.Rd:23: unknown macro '\href' prepare_Rd: aSAH.Rd:41: unknown macro '\href' prepare_Rd: auc.Rd:124: unknown macro '\href' prepare_Rd: auc.Rd:129: unknown macro '\href' prepare_Rd: auc.Rd:133: unknown macro '\href' prepare_Rd: auc.Rd:138: unknown macro '\href' prepare_Rd: ci.Rd:71: unknown macro '\href' prepare_Rd: ci.auc.Rd:190: unknown macro '\href' prepare_Rd: ci.se.Rd:128: unknown macro '\href' prepare_Rd: ci.se.Rd:137: unknown macro '\href' prepare_Rd: ci.sp.Rd:128: unknown macro '\href' prepare_Rd: ci.sp.Rd:137: unknown macro '\href' prepare_Rd: ci.thresholds.Rd:120: unknown macro '\href' prepare_Rd: ci.thresholds.Rd:129: unknown macro '\href' prepare_Rd: coords.Rd:188: unknown macro '\href' prepare_Rd: coords.Rd:193: unknown macro '\href' prepare_Rd: multiclass.Rd:90: unknown macro '\href' prepare_Rd: pROC-package.Rd:40: unknown macro '\href' prepare_Rd: pROC-package.Rd:138: unknown macro '\href' prepare_Rd: pROC-package.Rd:143: unknown macro '\href' prepare_Rd: plot.ci.Rd:75: unknown macro '\href' prepare_Rd: plot.roc.Rd:276: unknown macro '\href' prepare_Rd: roc.Rd:225: unknown macro '\href' prepare_Rd: roc.Rd:230: unknown macro '\href' prepare_Rd: roc.test.Rd:344: unknown macro '\href' prepare_Rd: roc.test.Rd:349: unknown macro '\href' prepare_Rd: roc.test.Rd:353: unknown macro '\href' prepare_Rd: smooth.roc.Rd:225: unknown macro '\href' prepare_Rd: smooth.roc.Rd:231: unknown macro '\href' * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking data for non-ASCII characters ... OK * checking examples ... OK * checking PDF version of manual ... OK