Exceptionnal Network Motifs in biological networks


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Documentation for package ‘NeMo’ version 1.0.1

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NeMo-package This package deals with discovering exceptional subgraphs or motifs in a network.
computePValue Computes the p-value for a Polya-Aeppli or geometric Poisson distribution
countMotif Count motifs or subgraphs in a network.
EDD Expected Degree Distribution (EDD) graph generator
getExceptMotif Compute the p-value of one or severals motif (subgraphs) in a network under a random graph model.
getGraph Transform network data to a NeMoGraph object
getMotifMoment Computes the two first moments of the motif count distribution under a random graph model.
MixNet MixNet graph generator
motif.list First motif lists
NeMo This package deals with discovering exceptional subgraphs or motifs in a network.