Routines for fitting kinetic models with one or more state variables to chemical degradation data


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Documentation for package ‘mkin’ version 0.8-11

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DFOP.solution Dual First-Order in Parallel kinetics
FOCUS_2006_A Datasets A to F from the FOCUS Kinetics report from 2006
FOCUS_2006_B Datasets A to F from the FOCUS Kinetics report from 2006
FOCUS_2006_C Datasets A to F from the FOCUS Kinetics report from 2006
FOCUS_2006_D Datasets A to F from the FOCUS Kinetics report from 2006
FOCUS_2006_E Datasets A to F from the FOCUS Kinetics report from 2006
FOCUS_2006_F Datasets A to F from the FOCUS Kinetics report from 2006
FOMC.solution First-Order Multi-Compartment kinetics
HS.solution Hockey-Stick kinetics
mkinerrmin Calculate the minimum error to assume in order to pass the variance test
mkinfit Fit a kinetic model to data with one or more state variables.
mkinmod Function to set up a kinetic model with one or more state variables.
mkinplot Plot the observed data and the fitted model of an mkinfit.
mkinresplot Function to plot residuals stored in an mkin object
mkinstart Generate starting parameters for optimisations
mkin_long_to_wide Convert a dataframe from long to wide format.
mkin_wide_to_long Convert a dataframe with observations over time into long format.
print.summary.mkinfit Summary method for class "mkinfit".
schaefer07_complex_case Metabolism data set used for checking the software quality of KinGUI
schaefer07_complex_results Metabolism data set used for checking the software quality of KinGUI
SFO.solution Single First-Order kinetics
SFORB.solution Single First-Order Reversible Binding kinetics
summary.mkinfit Summary method for class "mkinfit".