MARSS-package | Multivariate Autoregressive State-Space Model Estimation |
alldefaults | MARSS function defaults and allowed methods |
allowed.methods | MARSS function defaults and allowed methods |
as.marssm | Model Objects |
checkMARSSInputs | Check inputs to MARSS call |
checkModelList | Check model list passed into MARSS call |
convert.model.mat | Matrix Utilities |
CSEGriskfigure | Plot Extinction Risk Metrics |
CSEGtmufigure | Plot Forecast Uncertainty |
describe.marssm | MARSS function defaults and allowed methods |
fixed.free.to.formula | Matrix Utilities |
graywhales | Population Data Sets |
grouse | Population Data Sets |
harborSeal | Harbor Seal Population Count Data (Log counts) |
harborSealnomiss | Harbor Seal Population Count Data (Log counts) |
harborSealWA | Harbor Seal Population Count Data (Log counts) |
Imat | Matrix Utilities |
is.blockdiag | Matrix Utilities |
is.blockequaltri | Matrix Utilities |
is.blockunconst | Matrix Utilities |
is.design | Matrix Utilities |
is.diagonal | Matrix Utilities |
is.equaltri | Matrix Utilities |
is.fixed | Matrix Utilities |
is.identity | Matrix Utilities |
is.marssm | Model Objects |
is.marssMLE | Maximum Likelihood MARSS Estimation Object |
is.solvable | Matrix Utilities |
is.wholenumber | Matrix Utilities |
isleRoyal | Isle Royale Wolf and Moose Data |
ivesDataByWeek | Plankton Data Sets |
ivesDataLP | Plankton Data Sets |
kem.methods | MARSS function defaults and allowed methods |
kestrel | Population Data Sets |
lakeWAplankton | Plankton Data Sets |
loggerhead | Loggerhead Turtle Tracking Data |
loggerheadNoisy | Loggerhead Turtle Tracking Data |
makediag | Matrix Utilities |
MARSS | Interface MARSS Model Specification and Estimation |
MARSS.dfa | Multivariate Dynamic Factor Analysis |
MARSS.marxss | Multivariate AR-1 State-space Model with Inputs |
MARSSaic | AIC for MARSS models |
MARSSapplynames | Names for marssMLE Object Components |
MARSSboot | Bootstrap MARSS Parameter Estimates |
MARSShatyt | Compute Expected Value of Y,YY, and YX |
MARSShessian | MARSS Parameter Variance-Covariance Matrix from the Hessian Matrix |
MARSSinfo | Information for MARSS Error Messages and Warnings |
MARSSinits | Initial Values for MLE |
MARSSinnovationsboot | Bootstrapped Data using Stoffer and Wall's Algorithm |
MARSSkem | Maximum Likelihood Estimation for Multivariate Autoregressive State-Space Models |
MARSSkemcheck | Model Checking for MLE objects passed to MARSSkem |
MARSSkf | Kalman Filtering and Smoothing |
MARSSkfas | Kalman Filtering and Smoothing |
marssm | Model Objects |
marssm-class | Class "marssm" |
MARSSmcinit | Monte Carlo Initialization |
marssMLE | Maximum Likelihood MARSS Estimation Object |
marssMLE-class | Class "marssMLE" |
MARSSoptim | Parameter estimation for MARSS models using optim |
MARSSparamCIs | Confidence Intervals for MARSS Parameters |
MARSSresids | MARSS standardized residuals |
MARSSsettings | Interface MARSS Model Specification and Estimation |
MARSSsimulate | Simulate Data from a MARSS Model and Parameter Estimates |
MARSSvectorizeparam | Vector to Parameter Matrix Conversion |
matrix.power | Matrix Utilities |
mystrsplit | Matrix Utilities |
neglogLik | Parameter estimation for MARSS models using optim |
okanaganRedds | Population Data Sets |
optim.methods | MARSS function defaults and allowed methods |
parmat | Retrieve Parameter Matrix |
pcholinv | Matrix Utilities |
pinv | Matrix Utilities |
prairiechicken | Population Data Sets |
Printing function for MARSS MLE objects | |
print-method | Class "marssMLE" |
print-method | Class "marssm" |
print.MARSS | Printing function for MARSS MLE objects |
print.marssMLE | Printing function for MARSS MLE objects |
rockfish | Population Data Sets |
rwishart | Matrix Utilities |
stdInnov | Standardized Innovations |
sub3D | Matrix Utilities |
summary-method | Class "marssMLE" |
summary-method | Class "marssm" |
takediag | Matrix Utilities |
unvec | Matrix Utilities |
vec | Matrix Utilities |
wilddogs | Population Data Sets |