Matrix eQTL: Ultra fast eQTL analysis via large matrix operations


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Documentation for package ‘MatrixEQTL’ version 1.6.2

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MatrixEQTL-package Matrix eQTL: Ultra fast eQTL analysis via large matrix operations
as.matrix-method Class 'SlicedData' for storing large matrices
colMeans-method Class 'SlicedData' for storing large matrices
colnames-method Class 'SlicedData' for storing large matrices
colnames<--method Class 'SlicedData' for storing large matrices
colSums-method Class 'SlicedData' for storing large matrices
dim-method Class 'SlicedData' for storing large matrices
length-method Class 'SlicedData' for storing large matrices
MatrixEQTL Matrix eQTL: Ultra fast eQTL analysis via large matrix operations
Matrix_eQTL_engine Perform eQTL analysis.
Matrix_eQTL_main Perform eQTL analysis.
modelANOVA Constant for 'Matrix_eQTL_engine'.
modelLINEAR Constant for 'Matrix_eQTL_engine'.
modelLINEAR_CROSS Constant for 'Matrix_eQTL_engine'.
NCOL-method Class 'SlicedData' for storing large matrices
ncol-method Class 'SlicedData' for storing large matrices
NROW-method Class 'SlicedData' for storing large matrices
nrow-method Class 'SlicedData' for storing large matrices
plot.MatrixEQTL Plotting histogram or Q-Q plot of all p-values
rowMeans-method Class 'SlicedData' for storing large matrices
rownames-method Class 'SlicedData' for storing large matrices
rownames<--method Class 'SlicedData' for storing large matrices
rowSums-method Class 'SlicedData' for storing large matrices
show-method Class 'SlicedData' for storing large matrices
SlicedData Class 'SlicedData' for storing large matrices
SlicedData-class Class 'SlicedData' for storing large matrices
summary.SlicedData Class 'SlicedData' for storing large matrices
[[-method Class 'SlicedData' for storing large matrices
[[<--method Class 'SlicedData' for storing large matrices