RCircos-package | Circos-like Plot of Genomic Data |
RCircos | Circos-like Plot of Genomic Data |
RCircos.Base.Plot.Positions | Base Positions of Points for Circos Plot |
RCircos.Chromosome.Ideogram | Draw Chromosome Ideogram |
RCircos.Connector | Circos-like Connector Plot |
RCircos.Cytoband.Data | Chromosome Ideogram Data |
RCircos.Data.Point | Convert Genomic Position to Index of Circos Plot Position |
RCircos.Gene.Label | Circos-like Gene Label Plot |
RCircos.Gene.Label.Data | Sample Data for Gene Labels |
RCircos.Get.Label.Locations | Calculate New Position for Gene or Data Point Labels |
RCircos.Get.Plot.Data | Convert Genomic Data to Circos Plot Data |
RCircos.Heatmap | Circos-like Heamap Plot |
RCircos.Heatmap.Data | Sample Data for RCircos Heatmap Plot |
RCircos.Histogram | Circos-like Histogram Plot |
RCircos.Histogram.Data | Sample Data for Circos Histogram Plot |
RCircos.Initialize.Parameters | Initialize Graphics Parameters for Circos Plot |
RCircos.Line.Data | Sample Data for Circos Line Plot |
RCircos.Line.Plot | Circos-like Line Plot |
RCircos.Link.Data | Sample Data for Circos Link Plot |
RCircos.Link.Line | Draw A Circos Link Line |
RCircos.Link.Plot | ircos-like Link Line Plot |
RCircos.List.Parameters | Print out Graphic Parameters to Standard Output |
RCircos.Mouse.Expr.Data | Sample Data of Mouse Gene Expression |
RCircos.Rat.Expr.Data | Sample Data of Rat Gene Expression |
RCircos.Reset.Ideogram.Position | Reset Graphics Parameters Derived from Radius |
RCircos.Scatter.Data | Sample Data for Circos Scatter Plot |
RCircos.ScatterPlot | Circos-like Scatter Plot |
RCircos.Tile.Data | Sample Data for Circos Tile Plot |
RCircos.Tile.Plot | Circos-like Tile Plot |
RCircos.Track.Outline | Draw Outline of Data Plot Track |
RCircos.Track.Positions | Calculate Track Position For A Data Plot Track |
RCircos.Validate.Genomic.Data | Validate Input Genomic Data |
UCSC.Baylor.3.4.Rat.cytoBandIdeogram | Cytoband Information for Rat Chromosome Ideogram |
UCSC.HG19.Human.CytoBandIdeogram | Cytoband Information for Human Chromosome Ideogram |
UCSC.Mouse.GRCm38.CytoBandIdeogram | Cytoband Inforamtion for Mouse Chromosome Ideogram |