* using log directory 'd:/Rcompile/CRANpkg/local/2.14/intamap.Rcheck' * using R version 2.14.2 (2012-02-29) * using platform: i386-pc-mingw32 (32-bit) * using session charset: ISO8859-1 * checking for file 'intamap/DESCRIPTION' ... OK * this is package 'intamap' version '1.3-25' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking whether package 'intamap' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... OK * checking for unstated dependencies in tests ... OK * checking tests ... OK Running 'anisotropyTest.R' Comparing 'anisotropyTest.Rout' to 'anisotropyTest.Rout.save' ...242c242 < rgdal: version: 0.8-6, (SVN revision Unversioned directory) --- > rgdal: version: 0.8-5, (SVN revision 449) 245c245 < Path to GDAL shared files: d:/RCompile/CRANpkg/lib/2.14/rgdal/gdal --- > Path to GDAL shared files: C:/Program Files/R/R-2.15.3/library/rgdal/gdal 248c248 < Path to PROJ.4 shared files: d:/RCompile/CRANpkg/lib/2.14/rgdal/proj --- > Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.3/library/rgdal/proj Running 'block.R' Comparing 'block.Rout' to 'block.Rout.save' ...71c71 < rgdal: version: 0.8-6, (SVN revision Unversioned directory) --- > rgdal: version: 0.8-5, (SVN revision 449) 74c74 < Path to GDAL shared files: d:/RCompile/CRANpkg/lib/2.14/rgdal/gdal --- > Path to GDAL shared files: C:/Program Files/R/R-2.15.3/library/rgdal/gdal 77c77 < Path to PROJ.4 shared files: d:/RCompile/CRANpkg/lib/2.14/rgdal/proj --- > Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.3/library/rgdal/proj 87c87 < 3rd Qu.:180572 3rd Qu.:332727 3rd Qu.:6.374 3rd Qu.:0.16456 --- > 3rd Qu.:180572 3rd Qu.:332728 3rd Qu.:6.374 3rd Qu.:0.16456 93c93 < Mean :0.611132 Mean :0.38887 Mean :5.693 Mean :0.172651 --- > Mean :0.611132 Mean :0.38887 Mean :5.693 Mean :0.172652 Running 'idw.R' Comparing 'idw.Rout' to 'idw.Rout.save' ...32c32 < rgdal: version: 0.8-6, (SVN revision Unversioned directory) --- > rgdal: version: 0.8-5, (SVN revision 449) 35c35 < Path to GDAL shared files: d:/RCompile/CRANpkg/lib/2.14/rgdal/gdal --- > Path to GDAL shared files: C:/Program Files/R/R-2.15.3/library/rgdal/gdal 38c38 < Path to PROJ.4 shared files: d:/RCompile/CRANpkg/lib/2.14/rgdal/proj --- > Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.3/library/rgdal/proj Running 'interpolate.R' Comparing 'interpolate.Rout' to 'interpolate.Rout.save' ...26,27c26,27 < R 2013-03-29 17:00:29 interpolating 155 observations, 100 prediction locations < rgdal: version: 0.8-6, (SVN revision Unversioned directory) --- > R 2013-03-21 17:42:39 interpolating 155 observations, 100 prediction locations > rgdal: version: 0.8-5, (SVN revision 449) 30c30 < Path to GDAL shared files: d:/RCompile/CRANpkg/lib/2.14/rgdal/gdal --- > Path to GDAL shared files: C:/Program Files/R/R-2.15.3/library/rgdal/gdal 33c33 < Path to PROJ.4 shared files: d:/RCompile/CRANpkg/lib/2.14/rgdal/proj --- > Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.3/library/rgdal/proj 68c68 < R 2013-03-29 17:00:30 interpolating 155 observations, 100 prediction locations --- > R 2013-03-21 17:42:40 interpolating 155 observations, 100 prediction locations 131c131 < R 2013-03-29 17:00:30 interpolating 155 observations, 100 prediction locations --- > R 2013-03-21 17:42:40 interpolating 155 observations, 100 prediction locations 158c158 < R 2013-03-29 17:00:31 interpolating 30 observations, 24 prediction locations --- > R 2013-03-21 17:42:40 interpolating 30 observations, 24 prediction locations 164c164 < R 2013-03-29 17:00:35 interpolating 30 observations, 24 prediction locations --- > R 2013-03-21 17:42:44 interpolating 30 observations, 24 prediction locations 188,193c188,193 < Min. :179037 Min. :330314 Min. : 203.9 Min. : 5723 < 1st Qu.:179485 1st Qu.:330911 1st Qu.: 290.7 1st Qu.: 24183 < Median :179932 Median :331806 Median : 536.9 Median : 51920915 < Mean :179932 Mean :331806 Mean : 737.7 Mean : 50269438 < 3rd Qu.:180380 3rd Qu.:332701 3rd Qu.:1196.9 3rd Qu.:100000000 < Max. :180827 Max. :333298 Max. :1609.0 Max. :100000000 --- > Min. :179037 Min. :330314 Min. : 203.9 Min. : 5741 > 1st Qu.:179485 1st Qu.:330911 1st Qu.: 290.6 1st Qu.: 24420 > Median :179932 Median :331806 Median : 536.2 Median : 51941780 > Mean :179932 Mean :331806 Mean : 731.0 Mean : 50271919 > 3rd Qu.:180380 3rd Qu.:332701 3rd Qu.:1177.4 3rd Qu.:100000000 > Max. :180827 Max. :333298 Max. :1584.7 Max. :100000000 195,200c195,200 < Min. :0.0002259 Min. :186.3 < 1st Qu.:0.0064253 1st Qu.:237.7 < Median :0.0882568 Median :340.5 < Mean :0.1286659 Mean :386.1 < 3rd Qu.:0.2171210 3rd Qu.:481.7 < Max. :0.4152420 Max. :857.0 --- > Min. :0.000230 Min. :186.2 > 1st Qu.:0.006538 1st Qu.:237.6 > Median :0.087995 Median :339.6 > Mean :0.127678 Mean :384.6 > 3rd Qu.:0.214219 3rd Qu.:479.0 > Max. :0.414578 Max. :855.8 Running 'interpolateBlock.R' Comparing 'interpolateBlock.Rout' to 'interpolateBlock.Rout.save' ...24c24 < R 2013-03-29 17:00:38 interpolating 155 observations, 48 prediction locations --- > R 2013-03-21 17:42:47 interpolating 155 observations, 48 prediction locations 28c28 < rgdal: version: 0.8-6, (SVN revision Unversioned directory) --- > rgdal: version: 0.8-5, (SVN revision 449) 31c31 < Path to GDAL shared files: d:/RCompile/CRANpkg/lib/2.14/rgdal/gdal --- > Path to GDAL shared files: C:/Program Files/R/R-2.15.3/library/rgdal/gdal 34c34 < Path to PROJ.4 shared files: d:/RCompile/CRANpkg/lib/2.14/rgdal/proj --- > Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.3/library/rgdal/proj 74c74 < R 2013-03-29 17:00:39 interpolating 155 observations, 48 prediction locations --- > R 2013-03-21 17:42:48 interpolating 155 observations, 48 prediction locations Running 'javaR.R' Comparing 'javaR.Rout' to 'javaR.Rout.save' ...41c41 < rgdal: version: 0.8-6, (SVN revision Unversioned directory) --- > rgdal: version: 0.8-5, (SVN revision 449) 44c44 < Path to GDAL shared files: d:/RCompile/CRANpkg/lib/2.14/rgdal/gdal --- > Path to GDAL shared files: C:/Program Files/R/R-2.15.3/library/rgdal/gdal 47c47 < Path to PROJ.4 shared files: d:/RCompile/CRANpkg/lib/2.14/rgdal/proj --- > Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.3/library/rgdal/proj 65,70c65,70 < Min. :0.002098 Min. :8.349e-05 Min. :4.315 < 1st Qu.:0.137908 1st Qu.:2.154e-01 1st Qu.:4.635 < Median :0.380798 Median :6.192e-01 Median :5.105 < Mean :0.490286 Mean :5.097e-01 Mean :5.211 < 3rd Qu.:0.784647 3rd Qu.:8.621e-01 3rd Qu.:5.700 < Max. :0.999917 Max. :9.979e-01 Max. :6.971 --- > Min. :0.002098 Min. :0.0000835 Min. :4.315 > 1st Qu.:0.137908 1st Qu.:0.2153535 1st Qu.:4.635 > Median :0.380798 Median :0.6192015 Median :5.105 > Mean :0.490286 Mean :0.5097140 Mean :5.211 > 3rd Qu.:0.784647 3rd Qu.:0.8620915 3rd Qu.:5.700 > Max. :0.999917 Max. :0.9979020 Max. :6.971 Running 'linearVariogram.R' Comparing 'linearVariogram.Rout' to 'linearVariogram.Rout.save' ...40c40 < rgdal: version: 0.8-6, (SVN revision Unversioned directory) --- > rgdal: version: 0.8-5, (SVN revision 449) 43c43 < Path to GDAL shared files: d:/RCompile/CRANpkg/lib/2.14/rgdal/gdal --- > Path to GDAL shared files: C:/Program Files/R/R-2.15.3/library/rgdal/gdal 46c46 < Path to PROJ.4 shared files: d:/RCompile/CRANpkg/lib/2.14/rgdal/proj --- > Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.3/library/rgdal/proj Running 'minimal.R' Comparing 'minimal.Rout' to 'minimal.Rout.save' ...48c48 < rgdal: version: 0.8-6, (SVN revision Unversioned directory) --- > rgdal: version: 0.8-5, (SVN revision 449) 51c51 < Path to GDAL shared files: d:/RCompile/CRANpkg/lib/2.14/rgdal/gdal --- > Path to GDAL shared files: C:/Program Files/R/R-2.15.3/library/rgdal/gdal 54c54 < Path to PROJ.4 shared files: d:/RCompile/CRANpkg/lib/2.14/rgdal/proj --- > Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.3/library/rgdal/proj Running 'transGaussian.R' Comparing 'transGaussian.Rout' to 'transGaussian.Rout.save' ...19c19 < R 2013-03-29 17:00:50 interpolating 155 observations, 3103 prediction locations --- > R 2013-03-21 17:42:58 interpolating 155 observations, 3103 prediction locations 21c21 < rgdal: version: 0.8-6, (SVN revision Unversioned directory) --- > rgdal: version: 0.8-5, (SVN revision 449) 24c24 < Path to GDAL shared files: d:/RCompile/CRANpkg/lib/2.14/rgdal/gdal --- > Path to GDAL shared files: C:/Program Files/R/R-2.15.3/library/rgdal/gdal 27c27 < Path to PROJ.4 shared files: d:/RCompile/CRANpkg/lib/2.14/rgdal/proj --- > Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.3/library/rgdal/proj Running 'unbiased.R' Comparing 'unbiased.Rout' to 'unbiased.Rout.save' ...44c44 < rgdal: version: 0.8-6, (SVN revision Unversioned directory) --- > rgdal: version: 0.8-5, (SVN revision 449) 47c47 < Path to GDAL shared files: d:/RCompile/CRANpkg/lib/2.14/rgdal/gdal --- > Path to GDAL shared files: C:/Program Files/R/R-2.15.3/library/rgdal/gdal 50c50 < Path to PROJ.4 shared files: d:/RCompile/CRANpkg/lib/2.14/rgdal/proj --- > Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.3/library/rgdal/proj 55,56c55,56 < Median :180026 Median :332077 Median :6.230 Median :0.2515 < Mean :180026 Mean :332077 Mean :6.217 Mean :0.3950 --- > Median :180026 Median :332078 Median :6.230 Median :0.2515 > Mean :180026 Mean :332078 Mean :6.217 Mean :0.3950 180,181c180,181 < Median :180026 Median :332077 Median :5.963 Median :0.5793 < Mean :180026 Mean :332077 Mean :6.024 Mean :0.6420 --- > Median :180026 Median :332078 Median :5.963 Median :0.5793 > Mean :180026 Mean :332078 Mean :6.024 Mean :0.6420 * checking PDF version of manual ... OK