Gini methodology-based correlation and clustering analysis of both microarray and RNA-Seq gene expression data

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Documentation for package ‘rsgcc’ version 1.0.1

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rsgcc-package Gini-based correlation and clustering analysis of microarray and RNA-Seq gene expression data
cor.matrix correlation calculation for a data matrix
cor.pair compute correlations for a gene pair
data example of RNA-Seq data
gcc.cor.matrix correlation calculation for a data matrix
gcc.cor.pair compute correlations for a gene pair
gcc.corfinal get the final correlaiton and p-value of Gini method
gcc.cormatrix correlation calculation for a data matrix
gcc.corpair compute correlations for a gene pair
gcc.dist compute distance matrix for hierarchical clustering
gcc.hclust hierarchical cluster
gcc.heatmap heat map
gcc.tsheatmap correlaiton and clustering analysis of tissue-specific genes
getsgene identify tissue(or condtion)-specific genes
onegcc compute one Gini correlation coefficient
rnaseq example of RNA-Seq data
rsgcc Gini-based correlation and clustering analysis of microarray and RNA-Seq gene expression data
rsgcc.gui graphical user interface (GUI) of rsgcc package
uniqueTissues get tissue information