topologyGSA


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Documentation for package ‘topologyGSA’ version 1.2.0

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clique.mean.test Comparison of all the cliques of a pathway.
clique.var.test Testing the concentration matrices of all cliques of a pathway.
dag_bcell DAG representation of the B cell receptor signaling pathway
exp1 Gene expression signatures in acute lymphocytic leukemia for BCR signaling pathway
exp2 Gene expression signatures in acute lymphocytic leukemia for BCR signaling pathway
pathway.mean.test Testing the means of a pathway.
pathway.var.test Testing the concentration matrices of a pathway.
render.significant.cliques Graphical display of the significant cliques