Group l1 penalized logistic normal multinomial (LNM) regression model.


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Documentation for package ‘PenLNM’ version 1.0

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PenLNM-package Group $l_1$ penalized logistic normal multinomial *LNM* regression model.
Genera3 Taxa count data set of genera Bacteroids, Prevetella and Ruminococcus.
Nutrients Data matrix of nutrients
PenLN.CV Perform penalized LN model over a grid of penalty parameter values and returns the selected penalty based on cross-validation criterion.
PenLNM Estimate the group l1 penalized LN/LNM model.
PenLNM.CV Calculate the cross-validation of the penalized LNM approach for a pre-assigned penalty value.
PenLNM.lmax Find the maximum penalty in the group l1 penalized LNM model