A B C D E F G H I J L M N O P Q R S T U V W
ancestors | Simple operations on undirected and directed acyclic graphs. |
ancestralGraph | Simple operations on undirected and directed acyclic graphs. |
ancestralSet | Simple operations on undirected and directed acyclic graphs. |
arrayCombine | Combine arrays |
arrayExtendDomain | Combine arrays |
as.adjMAT | Coercion of graphs |
as.gmData | Class "gmData" graphical meta data |
as.gmData.array | Class "gmData" graphical meta data |
as.gmData.data.frame | Class "gmData" graphical meta data |
as.gmData.table | Class "gmData" graphical meta data |
as.parray | Representation of and operations on multidimensional tables |
ashtrees | Crown dieback in ash trees |
BodyFat | Body Fat Data |
breastcancer | Gene expression signatures for p53 mutation status in 250 breast cancer samples |
cad1 | Coronary artery disease data |
cad2 | Coronary artery disease data |
carcass | Lean meat contents of 344 pig carcasses |
carcassall | Lean meat contents of 344 pig carcasses |
chestSim | Simulated data from the Chest Clinic example |
chestSim1000 | Simulated data from the Chest Clinic example |
chestSim10000 | Simulated data from the Chest Clinic example |
chestSim100000 | Simulated data from the Chest Clinic example |
chestSim500 | Simulated data from the Chest Clinic example |
chestSim50000 | Simulated data from the Chest Clinic example |
children | Simple operations on undirected and directed acyclic graphs. |
closure | Simple operations on undirected and directed acyclic graphs. |
colSumsPrim | Utility functions for gRbase |
colwiseProd | Utility functions for gRbase |
combnPrim | Generate All Combinations of n Elements Taken m at a Time |
compareModels | Generic function for model comparison |
compile | Compile and propagate functions |
conc2pcor | Partial correlation (matrix) |
cov2pcor | Partial correlation (matrix) |
dag | Create undirected and directed graphs |
dagList | Create undirected and directed graphs |
data2parray | Representation of and operations on multidimensional tables |
dataOrigin | Class "gmData" graphical meta data |
dataOrigin.gmData | Class "gmData" graphical meta data |
description | Class "gmData" graphical meta data |
description.gmData | Class "gmData" graphical meta data |
description<- | Class "gmData" graphical meta data |
description<-.gmData | Class "gmData" graphical meta data |
dietox | Growth curves of pigs in a 3x3 factorial experiment |
dumping | Gastric Dumping |
edgeList | Find edges in a graph and edges not in a graph. |
edgeList.graphNEL | Find edges in a graph and edges not in a graph. |
edgeList.matrix | Find edges in a graph and edges not in a graph. |
edgeListMAT | Find edges in a graph and edges not in a graph. |
fit | Class "gRfit" - fitted graphical models |
fit.hllm | Hierarchical log-linear models |
formula | Class "gModel" - graphical models |
formula.gModel | Class "gModel" - graphical models |
formula<- | Class "gModel" - graphical models |
formula<-.gModel | Class "gModel" - graphical models |
getCliques | Get cliques of an undirected graph |
getCliques.default | Get cliques of an undirected graph |
getCliques.graphNEL | Get cliques of an undirected graph |
getFit | Class "gRfit" - fitted graphical models |
getFit.gRfit | Class "gRfit" - fitted graphical models |
getFit<- | Class "gRfit" - fitted graphical models |
getFit<-.gRfit | Class "gRfit" - fitted graphical models |
glist2adjMAT | Creates adjacency matrix for a graph from a list of generators |
gmData | Class "gModel" - graphical models |
gmData.gModel | Class "gModel" - graphical models |
gmData<- | Class "gModel" - graphical models |
gmData<-.gModel | Class "gModel" - graphical models |
gModel | Class "gModel" - graphical models |
gModel-class | Class "gModel" - graphical models |
graphNEL2adjMAT | Coercion of graphs |
graphNEL2dgCMatrix | Coercion of graphs |
graphNEL2ftM | Coercion of graphs |
graphNEL2matrix | Coercion of graphs |
gRbase | The package 'gRbase': summary information |
gRfit | Class "gRfit" - fitted graphical models |
hllm | Hierarchical log-linear models |
hllm-class | Hierarchical log-linear models |
intersectPrim | Utility functions for gRbase |
iplot | Function for plotting graphs using the 'igraph' package. |
iplot.graphNEL | Function for plotting graphs using the 'igraph' package. |
is.adjMAT | Check properties of graphs. |
is.complete | Simple operations on undirected and directed acyclic graphs. |
is.DAG | Check properties of graphs. |
is.DAG.graphNEL | Check properties of graphs. |
is.DAG.Matrix | Check properties of graphs. |
is.DAG.matrix | Check properties of graphs. |
is.DAGMAT | Check properties of graphs. |
is.decomposition | Simple operations on undirected and directed acyclic graphs. |
is.insetlist | Set operations |
is.simplicial | Simple operations on undirected and directed acyclic graphs. |
is.subsetof | Set operations |
is.TUG | Check properties of graphs. |
is.TUG.graphNEL | Check properties of graphs. |
is.TUG.Matrix | Check properties of graphs. |
is.TUG.matrix | Check properties of graphs. |
is.TUGMAT | Check properties of graphs. |
is.UG | Check properties of graphs. |
is.UG.graphNEL | Check properties of graphs. |
is.UG.Matrix | Check properties of graphs. |
is.UG.matrix | Check properties of graphs. |
is.UGMAT | Check properties of graphs. |
isin | Set operations |
jTree | Create RIP ordering of the cliques of an undirected graph; create junction tree. |
jTree.graphNEL | Create RIP ordering of the cliques of an undirected graph; create junction tree. |
jTree.Matrix | Create RIP ordering of the cliques of an undirected graph; create junction tree. |
jTree.matrix | Create RIP ordering of the cliques of an undirected graph; create junction tree. |
jTreeMAT | Create RIP ordering of the cliques of an undirected graph; create junction tree. |
junctionTree | Create RIP ordering of the cliques of an undirected graph; create junction tree. |
junctionTree.graphNEL | Create RIP ordering of the cliques of an undirected graph; create junction tree. |
junctionTree.Matrix | Create RIP ordering of the cliques of an undirected graph; create junction tree. |
junctionTree.matrix | Create RIP ordering of the cliques of an undirected graph; create junction tree. |
junctionTreeMAT | Create RIP ordering of the cliques of an undirected graph; create junction tree. |
latent | Class "gmData" graphical meta data |
latent.gmData | Class "gmData" graphical meta data |
latent<- | Class "gmData" graphical meta data |
latent<-.gmData | Class "gmData" graphical meta data |
lizard | Lizard behaviour |
lizardAGG | Lizard behaviour |
lizardRAW | Lizard behaviour |
matchPrim | Utility functions for gRbase |
math | Mathematics marks for students |
mathmark | Mathematics marks for students |
maxCliqueMAT | Get cliques of an undirected graph |
maximalSets | Set operations |
mcs | Maximum cardinality search on undirected graph. |
mcs.graphNEL | Maximum cardinality search on undirected graph. |
mcs.Matrix | Maximum cardinality search on undirected graph. |
mcs.matrix | Maximum cardinality search on undirected graph. |
mcsmarked | Maximum cardinality search on undirected graph. |
mcsmarked.graphNEL | Maximum cardinality search on undirected graph. |
mcsmarked.matrix | Maximum cardinality search on undirected graph. |
mcsmarkedMAT | Maximum cardinality search on undirected graph. |
mcsMAT | Maximum cardinality search on undirected graph. |
mildew | Mildew fungus |
milkcomp | Milk composition data |
milkcomp1 | Milk composition data |
minimalSets | Set operations |
minimalTriang | Minimal triangulation of an undirected graph |
minimalTriangMAT | Minimal triangulation of an undirected graph |
moralize | Moralize a directed acyclic graph |
moralize.graphNEL | Moralize a directed acyclic graph |
moralize.Matrix | Moralize a directed acyclic graph |
moralize.matrix | Moralize a directed acyclic graph |
moralizeMAT | Moralize a directed acyclic graph |
mpd | Maximal prime subgraph decomposition |
mpdMAT | Maximal prime subgraph decomposition |
newgmData | Class "gmData" graphical meta data |
nLevels | Class "gmData" graphical meta data |
nLevels.gmData | Class "gmData" graphical meta data |
nLevels<- | Class "gmData" graphical meta data |
nLevels<-.gmData | Class "gmData" graphical meta data |
nominal | Class "gmData" graphical meta data |
nominal.gmData | Class "gmData" graphical meta data |
nominal<- | Class "gmData" graphical meta data |
nominal<-.gmData | Class "gmData" graphical meta data |
nonEdgeList | Find edges in a graph and edges not in a graph. |
nonEdgeList.graphNEL | Find edges in a graph and edges not in a graph. |
nonEdgeList.matrix | Find edges in a graph and edges not in a graph. |
nonEdgeListMAT | Find edges in a graph and edges not in a graph. |
Nutrimouse | The Nutrimouse Dataset |
obs | Class "gmData" graphical meta data |
observations | Class "gmData" graphical meta data |
observations.gmData | Class "gmData" graphical meta data |
observations<- | Class "gmData" graphical meta data |
observations<-.gmData | Class "gmData" graphical meta data |
ordinal | Class "gmData" graphical meta data |
ordinal.gmData | Class "gmData" graphical meta data |
ordinal<- | Class "gmData" graphical meta data |
ordinal<-.gmData | Class "gmData" graphical meta data |
outerPrim | Utility functions for gRbase |
parents | Simple operations on undirected and directed acyclic graphs. |
parray | Representation of and operations on multidimensional tables |
print.gmData | Class "gmData" graphical meta data |
print.gModel | Class "gModel" - graphical models |
print.gRfit | Class "gRfit" - fitted graphical models |
propagate | Compile and propagate functions |
querygraph | Query a graph |
random_dag | Random directed acyclic graph |
rats | Weightloss of rats |
reinis | Risk factors for coronary heart disease. |
removeRedundant | Set operations |
rip | Create RIP ordering of the cliques of an undirected graph; create junction tree. |
rip.graphNEL | Create RIP ordering of the cliques of an undirected graph; create junction tree. |
rip.Matrix | Create RIP ordering of the cliques of an undirected graph; create junction tree. |
rip.matrix | Create RIP ordering of the cliques of an undirected graph; create junction tree. |
ripMAT | Create RIP ordering of the cliques of an undirected graph; create junction tree. |
rowSumsPrim | Utility functions for gRbase |
setdiffPrim | Utility functions for gRbase |
shortNames | Class "gmData" graphical meta data |
shortNames.gmData | Class "gmData" graphical meta data |
shortNames<- | Class "gmData" graphical meta data |
shortNames<-.gmData | Class "gmData" graphical meta data |
simplicialNodes | Simple operations on undirected and directed acyclic graphs. |
simulateArray | Simulate data from array |
stepwise.hllm | Hierarchical log-linear models |
subsetof | Set operations |
summary.gmData | Class "gmData" graphical meta data |
summary.gRfit | Class "gRfit" - fitted graphical models |
tableDiv | Compute table margin or table slice |
tableMargin | Compute table margin or table slice |
tableMult | Compute table margin or table slice |
tableOp | Compute table margin or table slice |
tableOp2 | Compute table margin or table slice |
tablePerm | Compute table margin or table slice |
tableSlice | Compute table margin or table slice |
tableSlicePrim | Compute table margin or table slice |
topoSort | Topological sort of vertices in directed |
topoSort.graphNEL | Topological sort of vertices in directed |
topoSort.Matrix | Topological sort of vertices in directed |
topoSort.matrix | Topological sort of vertices in directed |
topoSortMAT | Topological sort of vertices in directed |
topoSort_vparList | Topological sort of vertices in directed |
triangulate | Triangulation of an undirected graph |
triangulate.graphNEL | Triangulation of an undirected graph |
triangulate.Matrix | Triangulation of an undirected graph |
triangulate.matrix | Triangulation of an undirected graph |
triangulateMAT | Triangulation of an undirected graph |
ug | Create undirected and directed graphs |
ugList | Create undirected and directed graphs |
uniquePrim | Utility functions for gRbase |
unlistPrim | Utility functions for gRbase |
validVarTypes | Admissible variable types in gmData objects |
valueLabels | Class "gmData" graphical meta data |
valueLabels.gmData | Class "gmData" graphical meta data |
valueLabels<- | Class "gmData" graphical meta data |
valueLabels<-.gmData | Class "gmData" graphical meta data |
varNames | Class "gmData" graphical meta data |
varNames.gmData | Class "gmData" graphical meta data |
varNames<- | Class "gmData" graphical meta data |
varNames<-.gmData | Class "gmData" graphical meta data |
varTypes | Class "gmData" graphical meta data |
varTypes.gmData | Class "gmData" graphical meta data |
varTypes<- | Class "gmData" graphical meta data |
varTypes<-.gmData | Class "gmData" graphical meta data |
vpaL2adjMAT | Creates adjacency matrix for a graph from a list of generators |
vpaL2tfM | Creates adjacency matrix for a graph from a list of generators |
vpar | List of vertices and their parents for graph. |
vpar.graphNEL | List of vertices and their parents for graph. |
vpar.Matrix | List of vertices and their parents for graph. |
vpar.matrix | List of vertices and their parents for graph. |
vparMAT | List of vertices and their parents for graph. |
wine | Chemical composition of wine |