kobe-package |
Tools for Tuna RFMOs in the Kobe |
assmt |
Example Datasets |
kobe |
~~ Methods for Function 'kobe' in Package 'kobe' ~~ |
kobe-method |
~~ Methods for Function 'kobe' in Package 'kobe' ~~ |
kobe2box |
Reads pro2box projection results and returns stock and harvest rate relative to MSY reference points or proxies. |
kobeAspic |
Reads ASPIC bootstraps and projections and returns stock and harvest rate relative to MSY reference points |
kobeInterp |
Methods to generate the Kobe II Strategy Matrix. |
kobeInterp-method |
Methods to generate the Kobe II Strategy Matrix. |
kobeInterp-methods |
Methods to generate the Kobe II Strategy Matrix. |
kobeMFCL |
Reads Multifan-CL assessment results and returns stock and harvest rate relative to MSY reference points |
kobeP |
Calculates whether each point corresponds to being over-fished or subject to over-fishing and being in the red, green or yellow regions of the kobe phase plots quadrants. |
kobeP-method |
Calculates whether each point corresponds to being over-fished or subject to over-fishing and being in the red, green or yellow regions of the kobe phase plots quadrants. |
kobeP-methods |
Calculates whether each point corresponds to being over-fished or subject to over-fishing and being in the red, green or yellow regions of the kobe phase plots quadrants. |
kobePhase |
Kobe phase plot |
kobePhase-method |
Kobe phase plot |
kobePhase-methods |
Kobe phase plot |
kobePhaseMar |
Plots Kobe phase plot with marginal densities. |
kobeProb |
Calculates 2 dimenisonal confidence intervals for data pairs. |
kobeShade |
Shades matrix depending on value of elements |
kobeShade-method |
Shades matrix depending on value of elements |
kobeShade-methods |
Shades matrix depending on value of elements |
kobeSmry |
Calculates the probability of being over-fished or subject to over-fishing and being in the red, green or yellow regions of the kobe phase plots quadrants. |
kobeSmry-method |
Calculates the probability of being over-fished or subject to over-fishing and being in the red, green or yellow regions of the kobe phase plots quadrants. |
kobeSmry-methods |
Calculates the probability of being over-fished or subject to over-fishing and being in the red, green or yellow regions of the kobe phase plots quadrants. |
kobeSS |
Reads SS assessment results and returns stock and harvest rate relative to MSY reference points |
kobeTrks |
Calculates confidence intervals for different probabiity levels for pairs of data points. |
kobeTrks-method |
Calculates confidence intervals for different probabiity levels for pairs of data points. |
kobeTrks-methods |
Calculates confidence intervals for different probabiity levels for pairs of data points. |
multiplot |
Calculates confidence intervals for different probabiity levels for pairs of data points. |
prj |
Example Datasets |
prj1 |
Example Datasets |
sims |
Example Datasets |
theme_ms |
ggplot2 theme |