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| DNAprofiles-package | DNA profiles analysis |
| as.dbcompare | Convert output of ibs.pairwise.db for plotting using DNAtools package |
| dist.pair.cdf | CDF of product of a pair of distributions (one cumulative) |
| dist.unique.events | Trim probability distribution to unique events |
| dists.product | Distribution of product of several discrete random variables |
| dists.product.pair | Distribution of product of several discrete random variables as product X*Y |
| DNAprofiles | DNA profiles analysis |
| enum.profiles | Enumerate all attainable genotypes |
| find.kth.element | Quickly finds the k'th largest element in a (large) vector |
| freqsNLngm | Allelic frequencies at 15 NGM loci |
| freqsNLsgmplus | Allelic frequencies at 10 SGMplus loci |
| freqsUScaucs | Allelic frequencies at 13 CODIS loci |
| get.freqs | profiles object |
| ibdprobs | IBD probabilities |
| ibs.db | Counts IBS alleles between case profile and all database profiles |
| ibs.dist | Computes distribution of number of IBS alleles for profiles with stated relationship |
| ibs.pairs | Counts IBS alleles between profile pairs |
| ibs.pairwise.db | Pairwise comparison of all database profiles on IBS alleles |
| ibs.pairwise.db.exp | Expected value of number of pairwise matches of database profiles |
| ki.cdf | Computes CDF of KI between case profile and profile with stated relationship |
| ki.db | Computes KIs for case profile(s) with all database profiles |
| ki.dist | Computes distribution of KI for profiles with stated relationship |
| ki.ibs.joint.dist | Computes joint distribution of KI and IBS for profiles with stated relationship |
| ki.pairs | Computes Kinship Indices (KIs) for pairs of profiles |
| ki.pairs.precompute | Pre-computes KIs for use with 'ki.pairs' function |
| pr.next.allele | Probability of seeing next allele (Dirichlet sampling) |
| pr.next.alleles | Probability of seeing next alleles (Dirichlet sampling) |
| print.profiles | profiles object |
| profiles | profiles object |
| profiles extract | profiles extract |
| profiles.to.chars | Obtain STR repeat numbers of profiles as character matrix |
| recode.freqs | Recode allelic frequencies with different levels |
| rmp | Random match probability of profile(s) |
| sample.pairs | Sample random profile pairs with given relationship (sibs, parent/offspring, etc.) |
| sample.profiles | Sample random unrelated profiles |
| sample.relatives | Sample random relatives of one profile or many profiles |
| sim.q | Estimate LR exceedance probabilities (with importance sampling) |
| [.profiles | profiles extract |