dinucl {seqinr} | R Documentation |
This dataset contains the mean zscores as computed on all intergenic sequences (intergenic) and on all CDS (coding) from 242 complete bacterial chromosomes (as retrieved from Genome Reviews database on June 16, 2005).
data(dinucl)
List of two dataframes of 242 chromosomes and 16 dinucleotides: one for intergenic, one for coding sequences.
zscore
computed with the base
model on each intergenic sequencezscore
computed with the codon
model on each coding sequencePalmeira, L., Guéguen, L. and Lobry JR. (in prep) UV-targeted dinucleotides are not depleted in light-exposed Prokaryotic genomes.
citation("seqinr")
data(dinucl)