gbk2g2 {seqinr} | R Documentation |
This function reads a file in GenBank format and converts the features corresponding to CDS (Coding Sequences) into a format similar to glimmer program output.
gbk2g2(gbkfile = "ftp://pbil.univ-lyon1.fr/pub/logiciel/oriloc/ct.gbk", g2.coord = "g2.coord")
gbkfile |
The name of the GenBank file |
g2.coord |
The name of the glimmer-like file |
Partial CDS (either 5' or 3') and join in features are discarded.
J.R. lobry
citation("seqinr")
## Not run: gbk2g2()