BRugs | Introduction to BRugs |
BRugsFit | BRugs' meta function |
bugsData | Writing input for OpenBUGS |
bugsInits | Writing input for OpenBUGS |
buildMCMC | Generating mcmc.list objects for package coda |
currentValues | Last sampled values |
dicClear | DIC |
dicSet | DIC |
dicStats | DIC |
getGraphObj | Expert functions |
getNumChains | Number of chains |
getUpdaterObj | Expert functions |
help.BRugs | Introduction to BRugs |
help.WinBUGS | WinBUGS documentation |
loadModule | Load a module |
modelAdaptivePhase | Getting length of adaptive phase |
modelCheck | Checking the model file |
modelCompile | Compiling the model |
modelData | Loading the data |
modelDisable | Enable and disable factories to create updaters |
modelDisableDynamic | Controlling Dynamic Compilation |
modelEnable | Enable and disable factories to create updaters |
modelEnableDynamic | Controlling Dynamic Compilation |
modelGenInits | Generating initial values |
modelGetSeed | Seed of Random Number Generator |
modelInits | Loading initial values |
modelIteration | Returns number of iterations |
modelModules | Loaded modules |
modelNames | Get variable names in model |
modelPrecision | Setting precision for prec figures |
modelSaveState | Save the model's current state |
modelSetAP | Changing settings of updating algorithms |
modelSetIts | Changing settings of updating algorithms |
modelSetOR | Changing settings of updating algorithms |
modelSetSeed | Seed of Random Number Generator |
modelUpdate | Updating the model |
plotAutoC | Plot autocorrelation function for a scalar variable |
plotBgr | Plot the Gelman-Rubin convergence statistic for a scalar variable |
plotDensity | Plot density estimate or histogram of a scalar variable |
plotHistory | Trace of a scalar variable |
ranksClear | Calculation of ranks |
ranksSet | Calculation of ranks |
ranksStats | Calculation of ranks |
ratsdata | ratsdata example |
ratsinits | ratsdata example |
samplesAutoC | Plot autocorrelation function |
samplesBgr | Plot the Gelman-Rubin convergence statistic |
samplesClear | Clear recorded values |
samplesCoda | Writing files in CODA format |
samplesCorrel | Correlation |
samplesDensity | Plot density estimate or histogram |
samplesGetBeg | Get settings used for calculations |
samplesGetEnd | Get settings used for calculations |
samplesGetFirstChain | Get settings used for calculations |
samplesGetLastChain | Get settings used for calculations |
samplesGetThin | Get settings used for calculations |
samplesHistory | Trace of a variable |
samplesMonitors | Names of monitored scalar variables |
samplesSample | Stored values |
samplesSet | Start recording |
samplesSetBeg | Change settings used for calculations |
samplesSetEnd | Change settings used for calculations |
samplesSetFirstChain | Change settings used for calculations |
samplesSetLastChain | Change settings used for calculations |
samplesSetThin | Change settings used for calculations |
samplesSize | Size of the stored sample |
samplesStats | Calculate summary statistics |
setValues | Setting current values |
summaryClear | Summary of MCMC simulation |
summarySet | Summary of MCMC simulation |
summaryStats | Summary of MCMC simulation |
writeModel | Creating an OpenBUGS model file |