intervals {SNPassoc} | R Documentation |
Print ORs and 95% confidence intervals for an object of class 'haplo.glm'
Description
Print ORs and confidence intervals for an object of class 'haplo.glm'
Usage
intervals(o, level=.95, ...)
intervals.haplo.glm(o, level=.95, sign = 1, FUN=exp, ...)
print.intervals(x, len = 6, d = 2, exclude.intercept=TRUE, pval=TRUE, ...)
summary.haplo.glm(object, ...)
Arguments
o |
object of class 'haplo.glm' |
x |
object of class 'haplo.glm' |
object |
object of class 'haplo.glm' |
level |
significance level. Default is 95 percent |
sign |
sign |
FUN |
|
len |
length |
d |
number of decimals |
exclude.intercept |
is the intercept excluded? |
pval |
is p value printed? |
... |
other arguments |
Examples
# Not Run
# data(SNPs)
# tag.SNPs<-c("snp100019","snp10001","snp100029")
# geno<-make.geno(SNPs,tag.SNPs)
# mod<-haplo.glm(casco~geno,data=SNPs,
# family=binomial,
# locus.label=tag.SNPs,
# allele.lev=attributes(geno)$unique.alleles,
# control = haplo.glm.control(haplo.freq.min=0.05))
# intervals(mod)
# summary(mod)
[Package
SNPassoc version 1.0-2
Index]