Inference in Graphical Gaussian Models with Edge and Vertex Symmetries


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Documentation for package `gRcox' version 0.1

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A C D E F G J L M N P R S T V Z

-- A --

addECC Editing of RCOX models
addECCTest Model comparison in RCOX models

-- C --

carcass lean meat contents of pig carcasses
cclist2df Internal functions for the gRcox package
cholSolve Internal functions for the gRcox package
cliqueToEdges Internal functions for the gRcox package
compareAllCC Pairwise comparison of parameters in RCOX models
compareAllECC Pairwise comparison of parameters in RCOX models
compareAllVCC Pairwise comparison of parameters in RCOX models
compareCC Pairwise comparison of parameters in RCOX models
compareECC Pairwise comparison of parameters in RCOX models
compareVCC Pairwise comparison of parameters in RCOX models
copyInitial Internal functions for the gRcox package

-- D --

display Displays an RCOX model graphically (using the Rgraphviz package)
dropECC Editing of RCOX models
dropECCTest Model comparison in RCOX models

-- E --

ellK Internal functions for the gRcox package

-- F --

findCanonicalRepresentation Internal functions for the gRcox package
findFitRepresentations Internal functions for the gRcox package
findKinModel Internal functions for the gRcox package
findKinModelPrimitive Internal functions for the gRcox package
fitHYS Internal functions for the gRcox package
fitIPSedge Internal functions for the gRcox package
fitIPSset Internal functions for the gRcox package
fitNR Internal functions for the gRcox package
foooo Internal functions for the gRcox package

-- G --

getAtomCC Internal functions for the gRcox package
getCC Internal functions for the gRcox package
getCompCC Internal functions for the gRcox package
getCovConc Internal functions for the gRcox package
getCovCorr Internal functions for the gRcox package
getdf Internal functions for the gRcox package
getFormula Internal functions for the gRcox package
getIdxOfCC Internal functions for the gRcox package
getIndex Internal functions for the gRcox package
getInf Internal functions for the gRcox package
getKFromTheta Internal functions for the gRcox package
getNames Internal functions for the gRcox package
getParmVecEntry Internal functions for the gRcox package
getScore Internal functions for the gRcox package
getSlot Internal functions for the gRcox package
getThetaFromK Internal functions for the gRcox package
gRcox The package `gRcox': summary information

-- J --

joinCC Editing of RCOX models
joinCCTest Model comparison in RCOX models
joinECC Editing of RCOX models
joinECCTest Model comparison in RCOX models
joinForm Internal functions for the gRcox package
joinVCC Editing of RCOX models
joinVCCTest Model comparison in RCOX models

-- L --

listOrder Internal functions for the gRcox package

-- M --

makeIncMat Internal functions for the gRcox package
makeIncMatECC Internal functions for the gRcox package
makeIncMatList Internal functions for the gRcox package
makeIncMatVCC Internal functions for the gRcox package
math Mathematics marks for students
modifiedIPS Internal functions for the gRcox package
modifiedNewton Internal functions for the gRcox package
mparse Internal functions for the gRcox package
mparsemodel Internal functions for the gRcox package
multivariateNewton Internal functions for the gRcox package

-- N --

namesToPairs Internal functions for the gRcox package

-- P --

print.cctest Internal functions for the gRcox package
print.rcox Internal functions for the gRcox package
printIfDetails Internal functions for the gRcox package

-- R --

rconFit Internal functions for the gRcox package
rconFitHYD Internal functions for the gRcox package
rconFitHYS Internal functions for the gRcox package
rconFitIterative Internal functions for the gRcox package
rcorFit Internal functions for the gRcox package
rcorfit2 Internal functions for the gRcox package
rcorFitHYD Internal functions for the gRcox package
rcorFitIterative Internal functions for the gRcox package
rcox Main function for specifying RCON/RCOR models
rcox.control Internal functions for the gRcox package
rcoxFit Internal functions for the gRcox package
rcoxFitPrimitive Internal functions for the gRcox package
regulariseS Internal functions for the gRcox package
rescaleC Internal functions for the gRcox package

-- S --

setControl Internal functions for the gRcox package
showIfDisplay Internal functions for the gRcox package
shprint Internal functions for the gRcox package
splitCC Editing of RCOX models
splitCCTest Model comparison in RCOX models
splitECC Editing of RCOX models
splitECCTest Model comparison in RCOX models
splitForm Internal functions for the gRcox package
splitVCC Editing of RCOX models
splitVCCTest Model comparison in RCOX models
stepAddECC Stepwise selection of RCOX models
stepDropECC Stepwise selection of RCOX models
stepJoinCC Stepwise selection of RCOX models
stepJoinECC Stepwise selection of RCOX models
stepJoinVCC Stepwise selection of RCOX models
stepSplitCC Stepwise selection of RCOX models
stepSplitECC Stepwise selection of RCOX models
stepSplitVCC Stepwise selection of RCOX models
str2formula Internal functions for the gRcox package
summary.rcox Internal functions for the gRcox package

-- T --

testAddEdges Internal functions for the gRcox package
testSplitAllCC Internal functions for the gRcox package
trX Calculate trace of various matrix products
trXY Calculate trace of various matrix products
trXYXY Calculate trace of various matrix products
trXYZ Calculate trace of various matrix products
trXYZY Calculate trace of various matrix products

-- V --

varDiffConc Internal functions for the gRcox package
varDiffCorr Internal functions for the gRcox package

-- Z --

zeroAllECC Pairwise comparison of parameters in RCOX models
zeroECC Pairwise comparison of parameters in RCOX models