* using log directory 'd:/Rcompile/CRANpkg/local/2.5/arrayMissPattern.Rcheck' * using R version 2.5.1 (2007-06-27) * checking for file 'arrayMissPattern/DESCRIPTION' ... OK * this is package 'arrayMissPattern' version '1.3' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'arrayMissPattern' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * creating arrayMissPattern-Ex.R ... OK * checking examples ... WARNING Found the following significant warnings: Warning: 'gtkCListNew' is deprecated. Warning: 'method' is deprecated. Warning: 'method' is deprecated. Deprecated functions may be defunct as soon as of the next release of R. See ?Deprecated. * creating arrayMissPattern-manual.tex ... OK * checking arrayMissPattern-manual.tex ... OK