ask |
OBTAIN INPUT FROM USER WITH ERROR HANDLING |
assess.variance |
ASSESS CERTIAINTY IN VARIANCE ESTIMATE FOR LP/GP/WP MODEL |
bayescount |
ANALYSE COUNT DATA USING JAGS |
bayescount.single |
ANALYSE COUNT DATA USING JAGS |
dump.format |
PRODUCE A CHARACTER STRING IN THE R DUMP FORMAT TO BE USED WITH JAGS |
FECRT |
PERFORM AN ANALYSIS OF FAECAL EGG COUNT REDUCTION TEST DATA USING MCMC TO GIVE A PROBABILITY DISTRIBUTION OF VALUES FOR THE MEAN EGG COUNT REDUCTION |
fecrt |
PERFORM AN ANALYSIS OF FAECAL EGG COUNT REDUCTION TEST DATA USING MCMC TO GIVE A PROBABILITY DISTRIBUTION OF VALUES FOR THE MEAN EGG COUNT REDUCTION |
findJAGS |
ATTEMPT TO LOCATE A JAGS INSTALL |
findjags |
ATTEMPT TO LOCATE A JAGS INSTALL |
likelihood |
CALCULATE THE (LOG) LIKELIHOOD OF OBTAINING DATA FROM A DISTRIBUTION |
lnormal.params |
CALCULATE THE LOG-NORMAL MEAN AND STANDARD DEVIATION USING THE NORMAL MEAN AND STANDARD DEVIATION |
maximise.likelihood |
CALCULATE THE MAXIMUM LIKELIHOOD PARAMETERS OF A CONTINUOUS OR COUNT DISTRIBUTION |
new_unique |
CREATE A UNIQUE FILENAME |
normal.params |
CALCULATE THE NORMAL MEAN AND STANDARD DEVIATION USING THE LOG-NORMAL MEAN AND STANDARD DEVIATION |
run.JAGS |
RUN A USER SPECIFIED MODEL IN JAGS FROM WITHIN R |
run.jags |
RUN A USER SPECIFIED MODEL IN JAGS FROM WITHIN R |
run.model |
ANALYSE COUNT DATA USING JAGS |
testJAGS |
ANALYSE THE SYSTEM TO CHECK THAT JAGS IS INSTALLED |
testjags |
ANALYSE THE SYSTEM TO CHECK THAT JAGS IS INSTALLED |
timestring |
CALCULATE THE ELAPSED TIME IN SENSIBLE UNITS |