* using log directory 'd:/Rcompile/CRANpkg/local/2.7/SemiPar.Rcheck' * using R version 2.7.2 RC (2008-08-18 r46382) * using session charset: ISO8859-1 * checking for file 'SemiPar/DESCRIPTION' ... OK * this is package 'SemiPar' version '1.0-2' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'SemiPar' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE spm: no visible binding for global variable 'X.Declan' spm: no visible binding for global variable 'Z.Jaida' spm: no visible binding for global variable 'dummy.group.vec.Handan' spm: no visible binding for global variable 'Z.spline.Jaida' Found possibly global 'T' or 'F' in the following functions: default.bdry default.knots.2D dup imageLegend irls.ridge pointsInPoly * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... NOTE S3 methods shown with full name in documentation object 'fitted.spm': fitted.spm S3 methods shown with full name in documentation object 'lines.spm': lines.spm S3 methods shown with full name in documentation object 'plot.spm': plot.spm S3 methods shown with full name in documentation object 'predict.spm': predict.spm S3 methods shown with full name in documentation object 'print.spm': print.spm S3 methods shown with full name in documentation object 'residuals.spm': residuals.spm S3 methods shown with full name in documentation object 'summary.spm': summary.spm The \usage entries for S3 methods should use the \method markup and not their full name. See the chapter 'Writing R documentation files' in manual 'Writing R Extensions'. * checking data for non-ASCII characters ... OK * creating SemiPar-Ex.R ... OK * checking examples ... OK * creating SemiPar-manual.tex ... OK * checking SemiPar-manual.tex using pdflatex ... OK