GFMaps-package {GFMaps} | R Documentation |
Visualization technique for interpretation of high-throughput genetic or proteomic experiments.
Description
GFMaps integrates datasets derived from gene expression profiles with preexisting information from public
databases such as KEGG pathway or Gene Ontology using Gene Set Enrichment Analysis (GSEA) and introduce a framework that allow
us to visualize biologically annotated datasets and relevant ratings of genes via a color gradient.
Details
Package: | GFMaps |
Type: | Package |
Version: | 1.1 |
Date: | 2009-02-03 |
License: | GPL (>= 2) |
LazyLoad: | yes |
Author(s)
Dr. Sanjay Bhatikar sanjay.bhatikar@biobase.in, Kanika Arora kanika.arora@biobase.in
Maintainer: Kanika Arora kanika.arora@biobase.in
References
- 1.
- Subramanian, A., Tamayo, P., Mootha, V., K. Mukherjee, S., Ebert, B., L., Gillette, M., A., Paulvich, A., Pomeroy, S., L., Golub, T., R., Lander, E., S., Mesirov, J., P. (2005),Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles PNAS 102, 15545-15550
- 2.
- Subramanian, A., Keuhn, H., Gould, J., Tamayo, P., Mesirov, J., P. (2007),GSEA-P: a desktop application for Gene Set Enrichment Analysis Bioinformatics 23(23), 3251-3253
[Package
GFMaps version 1.1
Index]