* using log directory 'd:/Rcompile/CRANpkg/local/2.8/glmpath.Rcheck' * using R version 2.8.1 beta (2008-12-12 r47183) * using session charset: ISO8859-1 * checking for file 'glmpath/DESCRIPTION' ... OK * this is package 'glmpath' version '0.94' * checking package name space information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'glmpath' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking data for non-ASCII characters ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking for portable use of $BLAS_LIBS ... OK * creating glmpath-Ex.R ... OK * checking examples ... ERROR Running examples in 'glmpath-Ex.R' failed. The error most likely occurred in: > ### * bootstrap.path > > flush(stderr()); flush(stdout()) > > ### Name: bootstrap.path > ### Title: Generates a set of bootstrap coefficients for either glmpath or > ### coxpath > ### Aliases: bootstrap.path > ### Keywords: models regression > > ### ** Examples > > data(heart.data) > attach(heart.data) > bootstrap.a <- bootstrap.path(x, y, B=100, method="bic") > (stdout()) description class mode text opened can read "stdout" "terminal" "w" "text" "opened" "no" can write "yes" > > ### Name: cv.coxpath > ### Title: Computes cross-validated (minus) log-partial-likelihoods for > ### coxpath > ### Aliases: cv.coxpath > ### Keywords: models regression > > ### ** Examples > > data(lung.data) > attach(lung.data) The following object(s) are masked from heart.data : x > cv <- cv.coxpath(lung.data) CV Fold 1 CV Fold 2 CV Fold 3 CV Fold 4 CV Fold 5 > ict.glmpath Error: object "ict.glmpath" not found Execution halted