gcProfile {gcExplorer} | R Documentation |
Plot a single cluster of a 'kccasimple' object.
## S4 method for signature 'kccasimple': gcProfile(object, which, data = NULL, cexl = 0.8, xlab = "", ylab = "M", ylim=c(-6,6), cex.axis=1, xlabels=NULL, opar = par(las=1, mar=c(5, 4, 2, 0.5) + 0.1), data.type=c("time", "other"), legend=TRUE, ...)
object |
an object of class "kccasimple" |
data |
Plot either the data stored in object or external data. |
which |
Number of the cluster. |
cexl |
Point size of the legend. |
xlab |
Label for the x-axis. |
ylab |
Label for the y-axis. |
ylim |
Range of the y-axis. |
cex.axis |
Point size of x-axis. |
xlabels |
Positions on the x-axis. Default is 1:ncol(data) . |
opar |
Graphical parameters. |
data.type |
If the data come from arbitrary source (default) colnames of the data are used as xlabels if not stated otherwise using xlabels . If the data comes from a time course experiment x-values start at 0 and different time intervals are supported. |
legend |
Logical. Should a legend be drawn?. |
... |
Further arguments can be passed to matplot . |
Theresa Scharl
data("hsod") cl1 <- qtclust(hsod, radius=2, save.data=TRUE) gcProfile(cl1, which=5) gcProfile(cl1, which=5, xlabels=c(0,8,15,22,45,68,90,150,180), xlab="time after induction [min]",data.type="time")