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| bn_hsod | E. coli Fermentation Data |
| bn_oxy | Preprocessed microarray oxygen deprivation data |
| bn_ps19 | E. coli Fermentation Data |
| calcHCL | Graphical Cluster Explorer |
| centSpline | Further Distance and Centroid Computations |
| clusterPlot | Cluster solution plot |
| clusterPlot,kccasimple-method | Cluster solution plot |
| comp17 | E. coli Fermentation Data |
| comp19 | E. coli Fermentation Data |
| comp_diff | Functional Relevance Test |
| comp_dist | Compare Cluster Results |
| comp_perm | Compare Cluster Results |
| comp_test | Compare Cluster Results |
| DefinedCluster | Find clusters to a group |
| distJackCor | Further Distance and Centroid Computations |
| distJackEuc | Further Distance and Centroid Computations |
| distJackMan | Further Distance and Centroid Computations |
| distJackMax | Further Distance and Centroid Computations |
| edgeTest | Functional Relevance Test |
| f | E. coli Fermentation Data |
| fitsod | E. coli Fermentation Data |
| gcData | Create artificial cluster data |
| gcExplorer | Graphical Cluster Explorer |
| gcExplorer,kccasimple-method | Graphical Cluster Explorer |
| gcModify | Modify Ragraph Objects and Replot them |
| gcModify,graphdata-method | Modify Ragraph Objects and Replot them |
| gcOffline | Offline gcExplorer |
| gcOffline,kccasimple-method | Offline gcExplorer |
| gcProfile | Plot for cluster results |
| gcProfile,kccasimple-method | Plot for cluster results |
| gcSim | Create artificial cluster data |
| gcTable | HTML table for cluster results |
| gcTable,kccasimple-method | HTML table for cluster results |
| go.details | Functional Group Methods |
| go.details,data.frame-method | Functional Group Methods |
| gobp | E. coli Fermentation Data |
| graphdata-class | Graphical Cluster Explorer |
| Group2Cluster | Find clusters to a group |
| hsod | E. coli Fermentation Data |
| legend.size | Node Methods for Neighborhood Graphs |
| legend.size,kccasimple-method | Node Methods for Neighborhood Graphs |
| legend.tight | Node Methods for Neighborhood Graphs |
| legend.tight,kccasimple-method | Node Methods for Neighborhood Graphs |
| links_hsod | E. coli Fermentation Data |
| links_ps19 | E. coli Fermentation Data |
| newclsim | Functional Relevance Test |
| node.go | Node Methods for Neighborhood Graphs |
| node.go,kccasimple-method | Node Methods for Neighborhood Graphs |
| node.group | Node Methods for Neighborhood Graphs |
| node.group,kccasimple-method | Node Methods for Neighborhood Graphs |
| node.size | Node Methods for Neighborhood Graphs |
| node.size,kccasimple-method | Node Methods for Neighborhood Graphs |
| node.tight | Node Methods for Neighborhood Graphs |
| node.tight,kccasimple-method | Node Methods for Neighborhood Graphs |
| oxygen | Preprocessed microarray oxygen deprivation data |
| pattern | Expression pattern |
| ps19 | E. coli Fermentation Data |
| pvalFromPermMat | Compare Cluster Results |
| Random2Cluster | Find clusters to a group |
| reg | E. coli Sigma Factors and Global Regulators |
| sigma | E. coli Sigma Factors and Global Regulators |
| write.htmltable | Write a data frame into an html table within a html page |