summary.bce {BCE}R Documentation

summary BCE

Description

basic statistics of a bce object

Usage

summary.bce(object, confInt=2/3,...)

Arguments

object a bce-object, output of the function bce().
confInt confidence interval of values of composion matrix and ratio matrix.
... additional arguments affecting the summary produced.

Value

a list containing:

firstX X determined through least squares regression from the initial ratio matrix and the data matrix.
bestRat Ratio matrix for which the posterior probability is maximal.
bestX Composition matrix for which the posterior probability is maximal.
bestp Maximal posterior probability.
bestDat Product of bestRat and bestX.
meanRat Means of the elements of the ratio matrix.
sdRat Standard deviation of the elements of the ratio matrix.
lbRat Lower boundary of the confidence interval of the elements of the ratio matrix.
ubRat Upper boundary of the confidence interval of the elements of the ratio matrix.
covRat Covariance matrix of the elements of the ratio matrix.
meanX Means of the elements of the composition matrix.
sdX Standard deviation of the elements of the composition matrix.
lbX Lower boundary of the confidence interval of the elements of the composition matrix.
ubX Upper boundary of the confidence interval of the elements of the composition matrix.
covX Covariance matrix of the elements of the composition matrix.

Author(s)

Karel Van den Meersche

See Also

BCE, plot.bce, export.bce, pairs.bce

Examples

# bceOutput is an example output based on bceInput

summary(bceOutput)

[Package BCE version 1.4 Index]