ComputeSummaryStatistics {FEST}R Documentation

Computes summary likelihood statistics

Description

The function computes summary likelihood statistics for an object of type SimStudyObject-class that is returned from the function SimulationStudy.

Usage

ComputeSummaryStatistics(simObj, altHyp = "unrelated")

Arguments

simObj Object of type SimStudyObject-class
altHyp The alternative hypothesis to be used when doing likelihood ratio statistics

Value

posterior Three dimensional array, where element (i,j,k) is the average posterior probability for simulation sub study i, true model j and alternative model k. The sub studies correspond to the different number of markers specified in SimulationStudy
posterior.sd Standard deviation of the average posterior values. Same data structure as for posterior.
likrat Average likelihood ratio between true models and altHyp. Same data structure as for posterior.
likrat.sd Standard deviation of the average likelihood ratio. Same data structure as for posterior.
classrat Average number of times the likelihood ratio is positive. Same data structure as for posterior.
classrat.sd Standard deviation of the classrat statistics. Same data structure as for posterior.

Author(s)

Øivind Skare oivind.skare@medisin.uio.no

See Also

SimStudyObject-class, SimulationStudy


[Package FEST version 0.06 Index]