SimStudyObject-class {FEST}R Documentation

Class "SimStudyObject"

Description

An object returned by the 'SimulationStudy' function. Used as input to ComputeSummaryStatistics.

Objects from the Class

Objects can be created by calls of the form new("SimStudyObject", ...). describe objects here

Slots

posterior:
Two dimensional list structure, where posterior[[i]][[j]] is a matrix of posterior probabilites for data set i and true model j. Element (k,l) of the matrix contains the posterior probability of alternative model k for simulation j.
logLik:
Same data structure as for posterior containing the log likelihood values.
nsim:
Number of simulations.
nmarker:
Number of markers.
maf:
Minor allele frequency
freqThreshold:
A frequency threshold that have been used in selecting markers. Only markers with minor allele frequency larger than this threshold have been considered for selection.
model:
Object of class Model-class.

Methods

initialize
signature(.Object = "SimStudyObject"): ...

Author(s)

Øivind Skare oivind.skare@medisin.uio.no

See Also

SimulationStudy


[Package FEST version 0.06 Index]