userAddedSpecies {FunctSNP}R Documentation

Displays the species added by user

Description

Displays the species code and species name added by the user using addSpecies. The added species code can be used in:

 1. setSpecies () - to set the default species 
 2. Query-type Functions as an argument e.g. getSNPs (ids,speciescode="bta")

Usage

userAddedSpecies(refresh=FALSE)

Arguments

refresh TRUE or FALSE [Default = FALSE]

Value

A list of user species codes and their related species name.

Note

When the FunctSNP library is loaded, the user databases file is read and the contents assigned to an object. Use refresh=TRUE if you require to re-read the user databases file in the same R session.

Author(s)

S. J. Goodswen <Stephen.Goodswen@csiro.au>

See Also

setSpecies addSpecies

Examples

# List all user added species 
userAddedSpecies()


[Package FunctSNP version 1.0-1 Index]