downloadDB {FunctSNP} | R Documentation |
Download or update one or more pre-assembled databases for selected species.
downloadDB(speciesCode, db.list=FALSE)
speciesCode |
A vector containing 3 letter species codes [Default = the species code set by setSpecies()] |
db.list |
TRUE or FALSE [Default = FALSE] |
Use the argument db.list=TRUE to display the species codes for databases that can be downloaded
The function is called for its side-effect. It downloads a species specific database and saves it in the FunctSNP library.
Databases on the FunctSNP ftp site are updated on the first day of each month
S. J. Goodswen <Stephen.Goodswen@csiro.au>
http://www.csiro.au/science/FunctSNP.html
# list databases that can be downloaded downloadDB(db.list=TRUE) ## Not run: # Download a database for Bos taurus downloadDB("bta") # Download the databases for Gallus gallus and Sus scrofu species <- c("gga","ssc") downloadDB(species) # Download default species database set by setSpecies() downloadDB() ## End(Not run)