timedelay.univariate.lm {GeneReg}R Documentation

Internal function for time delay linear model

Description

timedelay.univariate.lm is an internal function for time delay linear model.

Usage

timedelay.univariate.lm(bspline.data, target, regulator,
maxdelay=ncol(bspline.data)*0.25,
single.adj.r.squared=0.8, min.coef=0.25, max.coef=4)

Arguments

bspline.data an interpolated expression matrix with genes in the rows, predicted time points in the columns
target target gene
regulator potential regulators
maxdelay max time points delay
single.adj.r.squared the cutoff of adjusted R squared of univariate regression
min.coef the regression coefficient should be larger than min.coef
max.coef the regression coefficient should be smaller than max.coef

[Package GeneReg version 1.1.1 Index]