timedelay.univariate.lm {GeneReg} | R Documentation |
Internal function for time delay linear model
Description
timedelay.univariate.lm is an internal function for time delay linear model.
Usage
timedelay.univariate.lm(bspline.data, target, regulator,
maxdelay=ncol(bspline.data)*0.25,
single.adj.r.squared=0.8, min.coef=0.25, max.coef=4)
Arguments
bspline.data |
an interpolated expression matrix with genes in the rows, predicted time points in the columns |
target |
target gene |
regulator |
potential regulators |
maxdelay |
max time points delay |
single.adj.r.squared |
the cutoff of adjusted R squared of univariate regression |
min.coef |
the regression coefficient should be larger than min.coef |
max.coef |
the regression coefficient should be smaller than max.coef |
[Package
GeneReg version 1.1.1
Index]