SNP-Haplotype Adaptive REgression (SHARE)


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Documentation for package ‘SHARE’ version 1.0.4

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SHARE-package An adaptive algorithm to select the most informative set of SNPs for genetic association
cshare Stepwise search for the most informative haplotypes
dplot SHARE output
dplot,share-method SHARE output
genoSeq Genotype Sequence Set
genoSeq,genoSet-method Genotype Sequence Set
genoSet Genotype Sequence Set
genoSet-class Genotype Sequence Set
haplo Haplotype Estimation
haplo,genoSet-method Genotype Sequence Set
haplo-class Haplotype Estimation Set
haploFreq Haplotype Set
haploFreq,haploSet-method Haplotype Set
haploSeq Haplotype Set
haploSeq,haploSet-method Haplotype Set
haploSet Haplotype Set
haploSet-class Haplotype Set
keremRandAllele Psudo-subjects from Kerem's Cystic Fibrosis Data
keremRandSeq Psudo-subjects from Kerem's Cystic Fibrosis Data
keremRandStatus Psudo-subjects from Kerem's Cystic Fibrosis Data
nameSeq Name of Sequences
nameSeq,genoSet-method Name of Sequences
nameSeq,haploSet-method Name of Sequences
nameSeq-methods Name of Sequences
nameSNP Name of SNPs
nameSNP,genoSet-method Name of SNPs
nameSNP,haploSet-method Name of SNPs
nameSNP-methods Name of SNPs
nSeq Number of Sequences
nSeq,genoSet-method Number of Sequences
nSeq,haploSet-method Number of Sequences
nSeq-methods Number of Sequences
nSNP Number of SNPs
nSNP,genoSet-method Number of SNPs
nSNP,haploSet-method Number of SNPs
nSNP-methods Number of SNPs
phenoData Genotype Sequence Set
phenoData,genoSet-method Genotype Sequence Set
SHARE An adaptive algorithm to select the most informative set of SNPs for genetic association
share SHARE output
share-class SHARE output
shareTest Permutation Test for the Results from SHARE Algorithm