WriteQC {aCGH.Spline} | R Documentation |
Write a QC report containing some summery statistics
WriteQC(filename, batch, x)
filename |
- the name for the output file. |
batch |
- TRUE or FALSE (is it being run in batch mode). |
x |
- a ".temp" formatted data stucture. |
Produces a table containing the filename, 68th percentile, dLRs and chromosme X median.
Tomas William Fitzgerald
chr = rnorm(1000,1,0) for (x in 2:24) { chr = c(chr, rnorm(1000,x,0)) } mat = matrix(ncol=7, nrow=length(chr)) mat[,1] = rnorm(length(chr),1000,150) mat[,2] = rnorm(length(chr),800,180) mat[,3] = chr mat[,4] = seq(1,length(chr), 1) mat[,5] = seq(1,length(chr), 1) mat[,6] = 0 mat[,7] = 0 WriteQC("test", batch=FALSE, mat)