carni70 {adephylo} | R Documentation |
This data set describes the phylogeny of 70 carnivora as reported by Diniz-Filho and Torres (2002). It also gives the geographic range size and body size corresponding to these 70 species.
data(carni70)
carni70
is a list containing the 2 following objects:
This dataset replaces the former version in ade4.
Diniz-Filho, J. A. F., and N. M. Tôrres. (2002) Phylogenetic comparative methods and the geographic range size-body size relationship in new world terrestrial carnivora. Evolutionary Ecology, 16, 351–367.
data(carni70) tre <- read.tree(text=carni70$tre) x <- phylo4d(tre, carni70$tab) table.phylo4d(x) par(mar=rep(.1,4)) table.phylo4d(x,cex.lab=.5, show.n=FALSE, ratio=.5) ## transform size in log and test for a phylogenetic signal size <- log(carni70$tab)[,1] names(size) <- row.names(carni70$tab) orthogram(size, tre) ## transform range and test for a phylogenetic signal yrange <- scalewt(carni70$tab)[,2] names(yrange) <- row.names(carni70$tab) orthogram(yrange, tre)