bclustvs {bclust}R Documentation

bclustvs (Bayesian CLUSTering with Variable Selection) is an object

Description

The bclustvs object can be regarded as a Bayesian extension of the hclust object that additionally contains information of a Bayesian dendrogram. You can convert any bclustvs object to a dendrogram object using as.dendrogram.

Value

data The data matrix, reordered according to rep.id.
repno The number of replicates of the values of rep.id
merge The merge matrix in hclust object format.
height A monotone vector referring to the height of the constructed tree.
logposterior The log posterior for each merge.
clust.number The number of clusters in each merge.
cut The value of the height corresponding to the maximum of the log posterior in agglomerative path.
transformed.par The transformed values of the model parameters. The log transformation is applied for the variance parameters, the identity for the mean, and the logit for the proportions.
labels The labels associated to each clustering type.
effect.family The distribution assigned to the disappearing random effect.
var.select Availability of variable selection chosen in the function arguments.

[Package bclust version 1.1 Index]