* using log directory 'd:/Rcompile/CRANpkg/local/2.9/PBSmodelling.Rcheck' * using R version 2.9.2 Patched (2009-09-02 r49531) * using session charset: ISO8859-1 * checking for file 'PBSmodelling/DESCRIPTION' ... OK * this is package 'PBSmodelling' version '2.55.175' * checking package name space information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'PBSmodelling' can be installed ... WARNING Found the following significant warnings: missing link(s): option-class missing link(s): option-class missing link(s): option-class missing link(s): option-class missing link(s): option-class See 'd:/Rcompile/CRANpkg/local/2.9/PBSmodelling.Rcheck/00install.out' for details. * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE .createWidget: no visible binding for global variable 'tkWidget' .createWidget.object: no visible global function definition for '.dispError' .createWidget.slideplus : saveSlideBounds: no visible binding for global variable 'minVal' .createWidget.slideplus : saveSlideBounds: no visible binding for global variable 'curVal' .createWidget.slideplus : saveSlideBounds: no visible binding for global variable 'maxVal' .dClose: no visible binding for global variable '.dwd' .dClose: no visible binding for global variable '.dls' .getPrefix: no visible binding for global variable 'prefix' .loadCRunComparison: no visible binding for global variable 'runs' .sortHelperActive: no visible binding for global variable 'PBS.history' .sortHelperActive: no visible binding for '<<-' assignment to 'PBS.history' .updateHistory: no visible binding for global variable 'PBS.history' .updateHistoryButtons: no visible binding for global variable 'PBS.history' .viewPkgDemo: no visible binding for global variable 'OK' addHistory: no visible binding for global variable 'PBS.history' addHistory: no visible binding for '<<-' assignment to 'PBS.history' backHistory: no visible binding for global variable 'PBS.history' backHistory: no visible binding for '<<-' assignment to 'PBS.history' calcMin : Sfun: no visible binding for '<<-' assignment to 'PBSmin' calcMin : Sfun: no visible binding for global variable 'PBSmin' calcMin: no visible binding for '<<-' assignment to 'PBSmin' calcMin: no visible binding for global variable 'PBSmin' clearHistory: no visible binding for global variable 'PBS.history' clearHistory: no visible binding for '<<-' assignment to 'PBS.history' createWin: no visible binding for global variable 'PBS.history' createWin: no visible binding for '<<-' assignment to 'PBS.history' createWin : .createMetaWidget.menu: no visible binding for global variable 'command' exportHistory: no visible binding for global variable 'PBS.history' firstHistory: no visible binding for global variable 'PBS.history' forwHistory: no visible binding for global variable 'PBS.history' forwHistory: no visible binding for '<<-' assignment to 'PBS.history' getChoice: no visible binding for global variable 'blist' importHistory: no visible binding for global variable 'PBS.history' importHistory: no visible binding for '<<-' assignment to 'PBS.history' jumpHistory: no visible binding for global variable 'PBS.history' jumpHistory: no visible binding for '<<-' assignment to 'PBS.history' lastHistory: no visible binding for global variable 'PBS.history' rmHistory: no visible binding for global variable 'PBS.history' rmHistory: no visible binding for '<<-' assignment to 'PBS.history' runDemos: no visible binding for global variable 'OK' runExamples : .runExHelperQuit: no visible binding for global variable '.cwd' runExamples : .runExHelperQuit: no visible binding for global variable '.cls' showHelp: no visible binding for global variable 'remote' showHelp: possible error in make.packages.html(temp = TRUE): unused argument(s) (temp = TRUE) sortHistory: no visible binding for global variable 'PBS.history' testWidgets : .testWidHelper: no visible binding for global variable 'wN' viewCode: no visible binding for global variable 'remote' viewCode: possible error in make.packages.html(temp = TRUE): unused argument(s) (temp = TRUE) * checking Rd files ... OK * checking Rd files against version 2 parser ... WARNING Warning: ./man/openUG.Rd:8: Unnecessary braces at '{openFile}' * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking data for non-ASCII characters ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking for portable use of $BLAS_LIBS ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * checking PDF version of manual ... OK