isa2-package |
The isa package |
generate.seeds |
Generate seed vectors for the Iterative Signature Algorithm |
images |
Image plots of biclusters |
isa |
Iterative Signature Algorithm |
isa,matrix-method |
Iterative Signature Algorithm |
isa.biclust |
Convert ISA modules to a Biclust class, as defined by the biclust package |
isa.filter.robust |
Robustness of ISA biclusters |
isa.filter.robust,matrix-method |
Robustness of ISA biclusters |
isa.in.silico |
Generate in-silico input data for biclustering algorithms |
isa.iterate |
The Iterative Signature Algorithm |
isa.iterate,list-method |
The Iterative Signature Algorithm |
isa.normalize |
Normalize input data for use with ISA |
isa.normalize,matrix-method |
Normalize input data for use with ISA |
isa.option |
Options for the isa package |
isa.sweep |
Create a hierarchical structure of ISA biclusters |
isa.sweep,matrix-method |
Create a hierarchical structure of ISA biclusters |
isa.unique |
Filter out biclusters that are very similar to each other |
isa.unique,list,list-method |
Filter out biclusters that are very similar to each other |
plotModules |
Image plots of biclusters |
plotModules,list-method |
Image plots of biclusters |
robustness |
Robustness of ISA biclusters |
robustness,list-method |
Robustness of ISA biclusters |
sweep.graph |
Create a hierarchical structure of ISA biclusters |
sweep.graph,list-method |
Create a hierarchical structure of ISA biclusters |