SS_profile {r4ss} | R Documentation |
Iteratively changes the control file using SS_changepars.
SS_profile(dir = "C:/myfiles/mymodels/myrun/", masterctlfile = "control.ss_new", newctlfile = "control_modified.ss", linenum = NULL, string = NULL, profilevec = NULL, command = "SS3 -nox", model = "ss3", systemcmd = F, saveoutput = T, verbose = T)
dir |
Directory where input files and executable are located. |
masterctlfile |
Source control file. Default = "control.ss_new" |
newctlfile |
Destination for new control files (must match entry in starter file). Default = "control_modified.ss". |
linenum |
Optional line number of parameter to be changed. Default = NULL. |
string |
Optional string partially matching name of parameter to be changed. Default = NULL. |
profilevec |
Vector of values to profile over. Default = NULL. |
command |
Call to executable. Default = "SS3 -nox". |
model |
Name of executable. Default = "ss3". |
systemcmd |
Should R call SS using "system" function intead of "shell". This may be required when running R in Emacs. Default = F. |
saveoutput |
Copy output .SSO files to unique names. Default = T. |
verbose |
Controls amount of info output to command line. Default = T. |
Ian Taylor