* using log directory 'd:/Rcompile/CRANpkg/local/3.1/ISwR.Rcheck' * using R version 3.1.3 (2015-03-09) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'ISwR/DESCRIPTION' ... OK * this is package 'ISwR' version '2.0-7' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'ISwR' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [3s] OK * checking for unstated dependencies in tests ... OK * checking tests ... [12s] OK Running 'allexercises.R' [6s] Comparing 'allexercises.Rout' to 'allexercises.Rout.save' ...207c207 < W = 0.957, p-value = 2.512e-08 --- > W = 0.95701, p-value = 2.512e-08 214c214 < W = 0.9687, p-value = 1.377e-06 --- > W = 0.96869, p-value = 1.377e-06 319c319 < t = 17.6732, df = 98, p-value < 2.2e-16 --- > t = 17.673, df = 98, p-value < 2.2e-16 380c380 < t = -3.0449, df = 8.663, p-value = 0.01453 --- > t = -3.0449, df = 8.6632, p-value = 0.01453 393c393 < t = -2.386, df = 9.086, p-value = 0.04058 --- > t = -2.386, df = 9.0865, p-value = 0.04058 496c496 < F = 254.1667, num df = 4.000, denom df = 162.434, p-value < 2.2e-16 --- > F = 254.17, num df = 4.00, denom df = 162.43, p-value < 2.2e-16 724c724 < 60-64:4 Hist.ctr. :6 Median :104.0 Median : 169261 --- > 60-64:4 Hist.ctr. :6 Median :104.0 Median : 169260 1140c1140 < t = 16.4286, df = 5, p-value = 1.525e-05 --- > t = 16.429, df = 5, p-value = 1.525e-05 2164c2164 < alpha 180.77123 1.93392 93.474 < 2e-16 *** --- > alpha 180.77131 1.93393 93.474 < 2e-16 *** 2167c2167 < da 62.03692 11.26004 5.509 4.46e-08 *** --- > da 62.03691 11.26006 5.509 4.46e-08 *** 2176c2176 < Achieved convergence tolerance: 1.743e-06 --- > Achieved convergence tolerance: 2.021e-06 Running 'allscripts.R' [6s] Comparing 'allscripts.Rout' to 'allscripts.Rout.save' ...58c58 < t = 0.3449, df = 5, p-value = 0.7442 --- > t = 0.34488, df = 5, p-value = 0.7442 486c486 < [1] 182 --- > [1] 186 518c518 < [1] "D:/temp/RtmpCqX4Wm/RLIBS_4b401e1e64dc/ISwR/rawdata/thuesen.txt" --- > [1] "/Users/pd/BIOSTAT/books/ISWR-2nd-ed/ISwR.Rcheck/ISwR/rawdata/thuesen.txt" 1007c1007 < F = 0.7844, num df = 12, denom df = 8, p-value = 0.6797 --- > F = 0.78445, num df = 12, denom df = 8, p-value = 0.6797 1048c1048 < t = 11.9414, df = 10, p-value = 3.059e-07 --- > t = 11.941, df = 10, p-value = 3.059e-07 1286c1286 < S = 1380.364, p-value = 0.1392 --- > S = 1380.4, p-value = 0.1392 1641c1641 < X-squared = 51.6556, df = 6, p-value = 2.187e-09 --- > X-squared = 51.656, df = 6, p-value = 2.187e-09 1666c1666 < X-squared = 28.8672, df = 4, p-value = 8.318e-06 --- > X-squared = 28.867, df = 4, p-value = 8.318e-06 2959c2959 < F = 0.8482, num df = 30, denom df = 17, p-value = 0.6731 --- > F = 0.84817, num df = 30, denom df = 17, p-value = 0.6731 3619,3620c3619,3620 < n events median 0.95LCL 0.95UCL < 205 57 NA NA NA --- > records n.max n.start events median 0.95LCL 0.95UCL > 205 205 205 57 NA NA NA 4177c4177 < Achieved convergence tolerance: 7.238e-09 --- > Achieved convergence tolerance: 1.582e-08 4214c4214 < Achieved convergence tolerance: 5.256e-06 --- > Achieved convergence tolerance: 5.243e-06 4230c4230 < alpha 255.97694 15.03920 17.021 <2e-16 *** --- > alpha 255.97696 15.03921 17.021 <2e-16 *** 4239c4239 < Achieved convergence tolerance: 2.764e-06 --- > Achieved convergence tolerance: 2.681e-06 4284c4284 < Achieved convergence tolerance: 5.446e-06 --- > Achieved convergence tolerance: 5.506e-06 4293c4293 < alpha 233.5007561 294.76267623 --- > alpha 233.5007560 294.76267652 4298,4300c4298,4300 < alpha 226.50064250 285.45323176 < beta 1.13125577 1.24772847 < gamma 0.05443819 0.08622691 --- > alpha 226.50065351 285.4532669 > beta 1.13125577 1.2477285 > gamma 0.05443818 0.0862269 * checking PDF version of manual ... OK * DONE