* using log directory 'd:/Rcompile/CRANpkg/local/3.1/R0.Rcheck' * using R version 3.1.3 (2015-03-09) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'R0/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'R0' version '1.2-6' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'R0' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [16s] OK * checking for unstated dependencies in tests ... OK * checking tests ... [18s] OK Running 'check.incid.R' [0s] Running 'est.GT.R' [0s] Running 'est.R0.AR.R' [0s] Running 'est.R0.EG.R' [1s] Running 'est.R0.ML.R' [1s] Running 'est.R0.SB.R' [1s] Running 'est.R0.TD.R' [1s] Running 'estimate.R.R' [1s] Running 'generation.time.R' [0s] Running 'sensitivity.analysis.R' [12s] Running 'sim.epid.R' [0s] Running 'smooth.Rt.R' [1s] * checking PDF version of manual ... OK * DONE