* using log directory 'd:/Rcompile/CRANpkg/local/3.1/TExPosition.Rcheck' * using R version 3.1.3 (2015-03-09) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'TExPosition/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'TExPosition' version '2.6.10' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'TExPosition' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... NOTE Packages in Depends field not imported from: 'ExPosition' 'prettyGraphs' These packages need to be imported from (in the NAMESPACE file) for when this namespace is loaded but not attached. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE computeLVConstraints: no visible global function definition for 'minmaxHelper' fii2fi: no visible global function definition for 'repmat' tepBADA: no visible global function definition for 'expo.scale' tepBADA: no visible global function definition for 'computeMW' tepBADA: no visible global function definition for 'epGPCA' tepBADA: no visible global function definition for 'supplementaryRows' tepBADA: no visible global function definition for 'supplementaryCols' tepDICA: no visible global function definition for 'makeNominalData' tepDICA: no visible global function definition for 'epCA' tepDICA: no visible global function definition for 'supplementaryRows' tepDICA: no visible global function definition for 'supplementaryCols' tepGPLS: no visible global function definition for 'expo.scale' tepGPLS: no visible global function definition for 'computeMW' tepGPLS: no visible global function definition for 'epGPCA' tepGPLS: no visible global function definition for 'supplementalProjection' tepGraphs: no visible global function definition for 'createColorVectorsByDesign' tepGraphs: no visible global function definition for 'prettyGraphsColorSelection' tepGraphs: no visible global function definition for 'calculateConstraints' tepGraphs: no visible global function definition for 'prettyPlot' tepGraphs: no visible global function definition for 'makeNominalData' tepGraphs: no visible global function definition for 'peeledHull' tepGraphs: no visible global function definition for 'contributionBars' tepPLS: no visible global function definition for 'expo.scale' tepPLS: no visible global function definition for 'epPCA' tepPLS: no visible global function definition for 'supplementalProjection' tepPLSCA: no visible global function definition for 'makeNominalData' tepPLSCA: no visible global function definition for 'coreCA' tepPLSCA: no visible global function definition for 'supplementalProjection' tepPLSCA: no visible global function definition for 'makeRowProfiles' texpoDesignCheck: no visible global function definition for 'designCheck' * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... OK * checking PDF version of manual ... OK * DONE NOTE: There were 2 notes.