Tools for Ecological Network Analysis


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Documentation for package ‘enaR’ version 2.9.1

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enaR-package Tools for Ecological Network Analysis (ena)
as.bipartite Create a bipartite network.
as.extended Create an Extended Format Matrix
bal Subfunction for Balancing by Either Inputs or Outputs
balance Balance Flow Network Models
bcratio Calculates the Ratio of Positive to Negative Elements in a Network
bgcModels Bigeochemical Cycling Models
cycliv Analysis of Feeding Cycles in a Network
eigenCentrality Calculates the Eigen Centrality of a Network
enaAll Conduct All Major ENA
enaAscendency Calculates the Ascendency of an Ecological Network
enaControl Control Analyses of Ecological Networks
enaCycle Full Cycle Analysis of Ecological Networks
enaEnviron Ecological Network Environs
enaFlow Flow Analyses of Ecological Networks
enaModelInfo Ecosystem Model Information
enaModels Ecosystem Models
enaMTI Mixed Trophic Impacts (MTI) Analysis
enaR Tools for Ecological Network Analysis (ena)
enaStorage Storage Analyses of Ecological Networks
enaStructure Structure Analyses of Ecological Network
enaTroAgg Trophic Aggregations (TroAgg) Analysis
enaUtility Utility Analysis of Ecological Networks
environCentrality Environ Centrality an Ecological Network
findPathLength Cumulative Flow over a Range of Path Lengths
force.balance Repeated Application the Balance Function
get.ns Quick Calculation of a Range of Network Statistics.
get.orient Get the Current Global Matrix Orientation Setting
m.list Sub-set of the Larger Ecosystem Models
mExp Calculates the Exponent of a Matrix
netOrder Reorder Nodes in a Network in enaR
oyster Intertidal Oyster Reef Ecosystem Model
pack Compile Network Information into a Network Class
read.enam Read ENA Model from an Mdloti Formatted Excel File
read.nea Read NEA Formatted Network Model
read.scor Read SCOR Formatted Model
read.wand Read WAND Formatted Model
scc Find the Strongly Connected Component (SCC) in a Graph
scifix Standardizes Scientific Notation from SCOR Formatted Files
set.orient Globally Set the Output Matrix Orientation
ssCheck Checks the Balance of Inputs and Outputs from a Network
structure.statistics Structural Statistics of an Ecological Network
TES Calculate the Total Environ Storage
TET Calculates the Total Environ Throughflow for a Ecosystem Network Model
troModels Trophic Models
unpack "Unpacks" the Network Object into Separate Objects
write.EcoNet Write enaR models to an EcoNet formatted file.
write.nea Write a Network Object to File Using the NEA Data Format