MINimal VALidation for Stoichiometric Reactions


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Documentation for package ‘minval’ version 0.3

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chebi Public data from ChEBI database release 136
chebi.candidates Returns the possible ChEBI names based on compound synonyms
chebi.formula Returns the molecular formula associated to a ChEBI compound name
chebi.id Returns the ChEBI id asociated to a compound name
compartments Identifies the compartments for a set of metabolites
glugln Stoichiometric reactions from the reconstructon of the glutamate/glutamine cycle
is.chebi Evaluates if a compound name is a ChEBI name
is.validsyntax Evaluates if a stoichiometric reaction has a valid syntax
metabolites Identifies the list of unique metabolites for a set of stoichiometric reactions
minval MINimal VALidation for Stoichiometric Reactions
orphan.products Identifies the orphan products for a set of stoichometric reactions
orphan.reactants Identifies the orphan reactants for a set of stoichometric reactions
products Identifies the products for a stoichometric reaction
reactants Identifies the reactants for a stoichometric reaction
toChEBI Translates compounds names to ChEBI ids in a stoichiometric reaction
unbalanced Evaluates if a stoichiometric reaction is mass-balanced