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| AddFactor | Adds a paramter to factor collection |
| AddResults | Concatenate results of multiple runs |
| AoE.Base | AoE.Base |
| AoE.ColumnCoV | AoE.ColumnCoV |
| AoE.CoV | AoE.CoV |
| AoE.FullFactorial | AoE.FullFactorial design generator |
| AoE.GetMorrisOutput | AoE.GetMorrisOutput |
| AoE.LatinHypercube | AoE.LatinHypercube |
| AoE.Morris | AoE.Morris |
| AoE.RandomSampling | AoE.RandomSampling experiment desing generator |
| AoE.RMSD | AoE.RMSD |
| AoE.Sobol | AoE.Sobol |
| AoE.Stability | AoE.Stability |
| ApplyFactorRange | Corrects the LHS design matrix |
| BuildParameterSet | Builds the simulation parameter set |
| ClearResults | Clear the results data.frame |
| createOutputDir | Create output directory |
| DFToMatrix | DFToMatrix |
| Easy.Calibration | Easy.Calibration |
| Easy.getChart | Easy.getChart |
| Easy.Morris | Easy API for Morris's screening method |
| Easy.Setup | Easy.Setup |
| Easy.Sobol | Easy API for Sobol's SA method |
| Easy.Stability | Easy API for output stability |
| Engine | Creates an instance of Engine |
| Engine.endAt | Configure the maximun simulated time for the current model run |
| Engine.Finish | Performs a cleanup on engine instance. |
| Engine.getId | Returns the model id |
| Engine.GetModelOutput | Gets the model output data as a CSV String array |
| Engine.getParameter | Get the value of model parameter s as java.lang.Object |
| Engine.getParameterAsDouble | Get the value of model parameter s as java.lang.Double |
| Engine.getParameterAsNumber | Get the value of model parameter s as java.lang.Number |
| Engine.getParameterAsString | Get the value of model parameter s as java.lang.String |
| Engine.getParameterNames | Parameter names |
| Engine.getParameterType | Get the type of a model parameter |
| Engine.LoadModel | Loads the scenario files |
| Engine.RunModel | Run the model |
| Engine.SetAggregateDataSet | Sets the model's dataset |
| Engine.setParameter | Set the value of model parameter |
| getExperimentDataset | Helper function to get experiment 'dataset' |
| getExperimentOutput | Helper function to get experiment 'output' |
| getExperimentParamSet | Helper function to get experiment 'paramset' |
| GetFactorsSize | Get the number of factors |
| getId | Gets the model name |
| getKeyRandom | Gets Repast randomSeed name |
| GetOutput | Gets the output |
| getOutputDir | Gets output directory |
| GetResults | Returns the model results |
| GetResultsParameters | Gets the parameters |
| GetSimulationParameters | Gets the simulation parameters |
| jvm.get_parameters | Gets the current java virtual machine parameters |
| jvm.init | Init R/JVM environment |
| jvm.resetOut | jvm.resetOut |
| jvm.setOut | jvm.setOut |
| jvm.set_parameters | Configures the jvm parameters |
| Load | The Scenario loader |
| Logger.setLevelInfo | Set the log level to INFO |
| Logger.setLevelWarning | Set the log level to WARNING |
| Model | The easy API for model initilization |
| PB.close | PB.close |
| PB.disable | PB.disable |
| PB.enable | PB.enable |
| PB.get | PB.get |
| PB.init | PB.init |
| PB.isEnabled | PB.isEnabled |
| PB.pset | PB.pset |
| PB.set | PB.set |
| PB.update | PB.update |
| Plot.Morris | Plot of Morris output |
| Plot.Sobol | Plot of Sobol output |
| Plot.Stability | Plot stability of output |
| Run | Run simulations |
| RunExperiment | Run an experimental setup |
| SaveSimulationData | Saving simulation output |
| SequenceItem | SequenceItem |
| setId | Sets the model name |
| setKeyRandom | Sets Repast randomSeed name |
| setOutputDir | Sets output directory |
| SetResults | Stores a data.frame |
| SetResultsParameters | Sets the parameters |
| SetSimulationParameter | SetSimulationParameter |
| SetSimulationParameters | Set parameters for running model |
| ShowClassPath | Java Classpath |
| ShowModelPaths | Prints the paths |