Draw Diagrams (mis)Representing the Results of Mass Spec Experiments


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Documentation for package ‘msarc’ version 1.4.5

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msarc-package msarc: Mass Spectrometry Experiment Plots
control_df Sample Data for the msarc Package
control_initial Sample Objects for the msarc Package
msarc Create msarc Object From Data Frame
msarc.copyColors Copy 'msarc' Color Palette
msarc.filterTerms Manipulate GO Term Lists
msarc.findGOterms Map UniProt Ids to GO Terms
msarc.getTerms Manipulate GO Term Lists
msarc.loadMS Create msarc Object From Mass Spec Data
msarc.loadTerms Manipulate GO Term Lists
msarc.plotCircle Draw 'msarc' Diagram without GO categories
msarc.plotHeatmap Correlation Heat Maps for Mass Spec Experiments
msarc.plotSVG Draw 'msarc' Diagram
msarc.saveTerms Manipulate GO Term Lists
msarc.subtract Subtract Control From Experiment
msarc.tagCloud Draw Tag Cloud
print.msarc Display an 'msarc' Object
sample_cluster Sample Objects for the msarc Package
sample_complete Sample Objects for the msarc Package
sample_df Sample Data for the msarc Package
sample_goterms Sample Objects for the msarc Package
sample_initial Sample Objects for the msarc Package
sample_subtracted Sample Objects for the msarc Package
summary.msarc Display an 'msarc' Object