Analysis of Single-Cell Viral Growth Curves


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Documentation for package ‘sicegar’ version 0.1

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categorize Categorize input data by comparing the AIC values of the three fitted models.
categorize_nosignal Checks for signal in the data.
dataCheck Checks if data is in correct format.
doublesigmoidalFitFormula Double Sigmoidal Formula
doublesigmoidalFitFunction Double sigmoidal fit function.
fitFunction fit function.
lineFitFormula Line fit formula.
lineFitFunction Linear fit function.
normalizeData Normalization of given data
numericalReCalculation Calls fitting algorithm with different initial parameters.
printInfectionCurves Prints infection curves.
sameSourceDataCheck Check is data came from the same source.
sigmoidalFitFormula sigmoidalFitFormula
sigmoidalFitFunction Sigmoidal fit function
unnormalizeData Unnormalization of given data