Short Tandem Repeats Analysis of Hotspot Zones


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Documentation for package ‘STRAH’ version 1.0

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STRAH-package STRAH: A package to detect DNA-motifs or short tandem repeats (STRs) in reference genomes
chr6_1580213_1582559 Sequence of human chromosome 6 from 1,580,213 until 1,582,559
chr6_1581473_1586032 Sequence of human chromosome 6 from 1,581,473 until 1,586,032
dsb_map Data of the DsbMap for humans
dsb_map_chimp_full Data of the DsbMap for chimpanzees
getflank2 Extract a specified region of the (human) genome
motif_detection DNA-motif detection in a given DNAStringSet, a given DNA-sequence in fasta-format, or a specified region of any genome
STRAH STRAH: A package to detect DNA-motifs or short tandem repeats (STRs) in reference genomes
STR_analysis Analysis of short tandem repeats (STRs) in a given region of any reference genome
STR_detection Detection of short tandem repeats (STRs) in a given region of any reference genome