CRAN Package Check Results for Package ProFound

Last updated on 2018-02-20 08:48:26 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.0 6.01 730.73 736.74 WARN
r-devel-linux-x86_64-debian-gcc 1.0.0 4.21 427.72 431.93 OK
r-devel-linux-x86_64-fedora-clang 1.0.0 60.52 ERROR
r-devel-linux-x86_64-fedora-gcc 1.0.0 58.66 ERROR
r-devel-windows-ix86+x86_64 1.0.0 8.00 697.00 705.00 OK
r-patched-linux-x86_64 1.0.0 2.76 690.28 693.04 WARN
r-patched-solaris-x86 1.0.0 258.60 WARN
r-release-linux-x86_64 1.0.0 2.64 693.10 695.74 WARN
r-release-windows-ix86+x86_64 1.0.0 7.00 988.00 995.00 OK
r-release-osx-x86_64 1.0.0 ERROR
r-oldrel-windows-ix86+x86_64 1.0.0 8.00 948.00 956.00 OK
r-oldrel-osx-x86_64 1.0.0 OK

Check Details

Version: 1.0.0
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Warning in replayPlot(x) : "grid" is not a graphical parameter
    Killed
Flavors: r-devel-linux-x86_64-debian-clang, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.0.0
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘EBImage’
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-release-osx-x86_64

Version: 1.0.0
Check: examples
Result: ERROR
    Running examples in ‘ProFound-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: ProFound-package
    > ### Title: Photometry Tools
    > ### Aliases: ProFound-package ProFound
    > ### Keywords: profile
    >
    > ### ** Examples
    >
    > # Load ProFound example data
    >
    > image=readFITS(system.file("extdata", 'VIKING/mystery_VIKING_Z.fits',
    + package="ProFound"))
    >
    > profound=profoundProFound(image, skycut=1.5, magzero=30, verbose=TRUE, plot=TRUE)
    Running ProFound:
    Supplied image contains image and header components
    Supplied image is 356 x 356 pixels
    Extracted pixel scale from header provided: 0.339 asec/pixel
    Supplied image is 2.011 x 2.011 amin, 0.001 deg-sq
    Making initial sky map - 0.003 sec
     - Sky statistics :
     Min. 1st Qu. Median Mean 3rd Qu. Max.
    -2.3257 -0.1157 0.5354 0.5499 1.0154 4.0443
     - Sky-RMS statistics :
     Min. 1st Qu. Median Mean 3rd Qu. Max.
     8.318 8.915 9.122 9.121 9.273 9.882
    Making initial segmentation image - 0.914 sec
     - Running MakeSegim:
    Error: The EBImage package is needed for this function to work. Please install it from Bioconductor.
    Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.0.0
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Quitting from lines 20-22 (ProFound-Complex-Fit.Rmd)
    Error: processing vignette 'ProFound-Complex-Fit.Rmd' failed with diagnostics:
    The EBImage package is needed for this function to work. Please install it from Bioconductor.
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.0.0
Check: examples
Result: ERROR
    Running examples in ‘ProFound-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: ProFound-package
    > ### Title: Photometry Tools
    > ### Aliases: ProFound-package ProFound
    > ### Keywords: profile
    >
    > ### ** Examples
    >
    > # Load ProFound example data
    >
    > image=readFITS(system.file("extdata", 'VIKING/mystery_VIKING_Z.fits',
    + package="ProFound"))
    >
    > profound=profoundProFound(image, skycut=1.5, magzero=30, verbose=TRUE, plot=TRUE)
    Running ProFound:
    Supplied image contains image and header components
    Supplied image is 356 x 356 pixels
    Extracted pixel scale from header provided: 0.339 asec/pixel
    Supplied image is 2.011 x 2.011 amin, 0.001 deg-sq
    Making initial sky map - 0.002 sec
     - Sky statistics :
     Min. 1st Qu. Median Mean 3rd Qu. Max.
    -2.3257 -0.1157 0.5354 0.5499 1.0154 4.0443
     - Sky-RMS statistics :
     Min. 1st Qu. Median Mean 3rd Qu. Max.
     8.318 8.915 9.122 9.121 9.273 9.882
    Making initial segmentation image - 1.041 sec
     - Running MakeSegim:
    Error: The EBImage package is needed for this function to work. Please install it from Bioconductor.
    Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.0.0
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Quitting from lines 33-63 (ProFound-Simulated-Images.Rmd)
    Error: processing vignette 'ProFound-Simulated-Images.Rmd' failed with diagnostics:
    Error while calculating model: std::bad_alloc
    Execution halted
Flavor: r-patched-solaris-x86

Version: 1.0.0
Check: examples
Result: ERROR
    Running examples in ‘ProFound-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: ProFound-package
    > ### Title: Photometry Tools
    > ### Aliases: ProFound-package ProFound
    > ### Keywords: profile
    >
    > ### ** Examples
    >
    > # Load ProFound example data
    >
    > image=readFITS(system.file("extdata", 'VIKING/mystery_VIKING_Z.fits',
    + package="ProFound"))
    >
    > profound=profoundProFound(image, skycut=1.5, magzero=30, verbose=TRUE, plot=TRUE)
    Running ProFound:
    Supplied image contains image and header components
    Supplied image is 356 x 356 pixels
    Extracted pixel scale from header provided: 0.339 asec/pixel
    Supplied image is 2.011 x 2.011 amin, 0.001 deg-sq
    Making initial sky map - 0.001 sec
     - Sky statistics :
     Min. 1st Qu. Median Mean 3rd Qu. Max.
    -2.3257 -0.1157 0.5354 0.5499 1.0154 4.0443
     - Sky-RMS statistics :
     Min. 1st Qu. Median Mean 3rd Qu. Max.
     8.318 8.915 9.122 9.121 9.273 9.882
    Making initial segmentation image - 1.103 sec
     - Running MakeSegim:
    Error: The EBImage package is needed for this function to work. Please install it from Bioconductor.
    Execution halted
Flavor: r-release-osx-x86_64

Version: 1.0.0
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Quitting from lines 20-22 (ProFound-Complex-Fit.Rmd)
    Error: processing vignette 'ProFound-Complex-Fit.Rmd' failed with diagnostics:
    The EBImage package is needed for this function to work. Please install it from Bioconductor.
    Execution halted
Flavor: r-release-osx-x86_64