Last updated on 2018-02-21 05:48:59 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.12.6 | 11.81 | 68.21 | 80.02 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.12.6 | 9.02 | 52.25 | 61.27 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.12.6 | 70.49 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.12.6 | 67.27 | ERROR | |||
| r-devel-windows-ix86+x86_64 | 0.12.6 | 59.00 | 132.00 | 191.00 | OK | |
| r-patched-linux-x86_64 | 0.12.6 | 4.83 | 66.54 | 71.37 | OK | |
| r-patched-solaris-x86 | 0.12.6 | 94.60 | OK | |||
| r-release-linux-x86_64 | 0.12.6 | 4.39 | 67.08 | 71.47 | OK | |
| r-release-windows-ix86+x86_64 | 0.12.6 | 28.00 | 215.00 | 243.00 | OK | |
| r-release-osx-x86_64 | 0.12.6 | OK | ||||
| r-oldrel-windows-ix86+x86_64 | 0.12.6 | 51.00 | 170.00 | 221.00 | OK | |
| r-oldrel-osx-x86_64 | 0.12.6 | OK |
Version: 0.12.6
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘BiocInstaller’
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.12.6
Check: tests
Result: ERROR
Running ‘winpath.R’
Running the tests in ‘tests/winpath.R’ failed.
Complete output:
> library(switchr)
> if(getOption("repos")["CRAN"] == "@CRAN@")
+ chooseCRANmirror(ind=2)
> checkUrlRoundtrip = function(pth) {
+ pth = switchr:::normalizePath2(pth)
+ furl = switchr:::makeFileURL(pth)
+ pth2 = switchr:::fileFromFileURL(furl)
+ if(pth != pth2)
+ stop("Round trip result (", pth2, ") does not match original (", pth, ") when creating file URLs")
+ }
>
> ## regression test to ensure that the roundtrip
> ## between path and file url is working properly
> checkUrlRoundtrip(getwd())
> checkUrlRoundtrip(tempdir())
> if(switchr:::isWindows())
+ checkUrlRoundtrip("\\\\laptop\\My Documents\\")
>
> ## regreossion test to ensure that package dependencies
> ## are added to the dontunload list when a package
> ## is specified
> bef = switchrDontUnload()
> af = switchrDontUnload("knitr")
Warning: unable to access index for repository http://bioconductor.org/packages/3.7/extra/src/contrib:
cannot open URL 'http://bioconductor.org/packages/3.7/extra/src/contrib/PACKAGES'
> stopifnot(all(c("stringr", "stringi", "magrittr") %in% af))
>
>
> ## regression test for unnecessary (and expensive)
> ## lazy repo construction when install_packages
> ## is passed urls for existing repos (the default
> ## behavior).
> tmplib = tempdir()
> trace(lazyRepo, stop)
Tracing function "lazyRepo" in environment <namespace:switchr>
Warning: Tracing only in the namespace; to untrace you will need:
untrace("lazyRepo", where = getNamespace("switchr"))
[1] "lazyRepo"
attr(,"package")
[1] "switchr"
> install_packages("switchr", repos = defaultRepos(), lib = tmplib)
Loading required namespace: RCurl
Error in FUN(X[[i]], ...) :
Unidentifiable string:http://bioconductor.org/packages/3.7/extra
Calls: install_packages ... install_packages -> getStringType -> unique -> sapply -> lapply -> FUN
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc