Last updated on 2018-03-05 09:47:29 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.0 | 1.39 | 20.74 | 22.13 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.1.0 | 0.80 | 17.72 | 18.52 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.1.0 | 32.18 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.0 | 30.41 | ERROR | |||
| r-devel-windows-ix86+x86_64 | 0.1.0 | 4.00 | 69.00 | 73.00 | OK | |
| r-patched-linux-x86_64 | 0.1.0 | 1.32 | 22.92 | 24.24 | ERROR | |
| r-patched-solaris-x86 | 0.1.0 | 40.20 | ERROR | |||
| r-release-linux-x86_64 | 0.1.0 | 1.06 | 23.17 | 24.23 | ERROR | |
| r-release-windows-ix86+x86_64 | 0.1.0 | 5.00 | 58.00 | 63.00 | OK | |
| r-release-osx-x86_64 | 0.1.0 | ERROR | ||||
| r-oldrel-windows-ix86+x86_64 | 0.1.0 | 3.00 | 37.00 | 40.00 | OK | |
| r-oldrel-osx-x86_64 | 0.1.0 | ERROR |
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘test.R’ [1s/1s]
Running the tests in ‘tests/test.R’ failed.
Complete output:
> # Use the default data to avoid token requirement for testing purposes
> # Generate markdown text string
> library(issueReporter)
> setwd(tempdir())
>
> testMD <- issuesData2md()
>
> # Use default data to generate PDF
> issuesGenPDF(style = "tint",
+ RmdLocation = system.file("rmarkdown/templates/", "tint.Rmd",
+ package = "issueReporter"),
+ outputFile = tempfile(pattern="ir", fileext=".pdf"),
+ outputDir = tempdir(),
+ md = testMD,
+ setTitle = "Example Notes",
+ setAuthor = "Author Name")
processing file: tint.Rmd
inline R code fragments
label: setup (with options)
List of 1
$ include: logi FALSE
ordinary text without R code
label: unnamed-chunk-1 (with options)
List of 2
$ results: chr "asis"
$ echo : logi FALSE
ordinary text without R code
Error in file(con, "w") : cannot open the connection
Calls: issuesGenPDF -> <Anonymous> -> <Anonymous> -> writeLines -> file
In addition: Warning messages:
1: In block_exec(params) : failed to tidy R code in chunk <setup>
reason: Error in loadNamespace(name) : there is no package called 'formatR'
2: In file(con, "w") :
cannot open file 'tint.knit.md': Read-only file system
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘test.R’ [1s/2s]
Running the tests in ‘tests/test.R’ failed.
Complete output:
> # Use the default data to avoid token requirement for testing purposes
> # Generate markdown text string
> library(issueReporter)
> setwd(tempdir())
>
> testMD <- issuesData2md()
>
> # Use default data to generate PDF
> issuesGenPDF(style = "tint",
+ RmdLocation = system.file("rmarkdown/templates/", "tint.Rmd",
+ package = "issueReporter"),
+ outputFile = tempfile(pattern="ir", fileext=".pdf"),
+ outputDir = tempdir(),
+ md = testMD,
+ setTitle = "Example Notes",
+ setAuthor = "Author Name")
processing file: tint.Rmd
inline R code fragments
label: setup (with options)
List of 1
$ include: logi FALSE
ordinary text without R code
label: unnamed-chunk-1 (with options)
List of 2
$ results: chr "asis"
$ echo : logi FALSE
ordinary text without R code
Error in file(con, "w") : cannot open the connection
Calls: issuesGenPDF -> <Anonymous> -> <Anonymous> -> writeLines -> file
In addition: Warning messages:
1: In block_exec(params) : failed to tidy R code in chunk <setup>
reason: Error in loadNamespace(name) : there is no package called 'formatR'
2: In file(con, "w") :
cannot open file 'tint.knit.md': Read-only file system
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘test.R’
Running the tests in ‘tests/test.R’ failed.
Complete output:
> # Use the default data to avoid token requirement for testing purposes
> # Generate markdown text string
> library(issueReporter)
> setwd(tempdir())
>
> testMD <- issuesData2md()
>
> # Use default data to generate PDF
> issuesGenPDF(style = "tint",
+ RmdLocation = system.file("rmarkdown/templates/", "tint.Rmd",
+ package = "issueReporter"),
+ outputFile = tempfile(pattern="ir", fileext=".pdf"),
+ outputDir = tempdir(),
+ md = testMD,
+ setTitle = "Example Notes",
+ setAuthor = "Author Name")
processing file: tint.Rmd
inline R code fragments
label: setup (with options)
List of 1
$ include: logi FALSE
ordinary text without R code
label: unnamed-chunk-1 (with options)
List of 2
$ results: chr "asis"
$ echo : logi FALSE
ordinary text without R code
output file: tint.knit.md
/usr/local/bin/pandoc +RTS -K512m -RTS tint.utf8.md --to latex --from markdown+autolink_bare_uris+ascii_identifiers+tex_math_single_backslash --output /tmp/Rtmp1UV1LF/irbf4c1dfa0791.tex --template /data/gannet/ripley/R/test-clang/tint/rmarkdown/templates/pdf/resources/tintPdf-template.tex --highlight-style pygments --latex-engine pdflatex --natbib --variable 'documentclass:tufte-handout'
You are recommended to install the tinytex package to build PDF.FALSE
Latexmk: This is Latexmk, John Collins, 17 Jan. 2018, version: 4.55.
Rule 'pdflatex': File changes, etc:
Changed files, or newly in use since previous run(s):
'irbf4c1dfa0791.aux'
------------
Run number 1 of rule 'pdflatex'
------------
------------
Running 'pdflatex -halt-on-error -interaction=batchmode -recorder "/tmp/Rtmp1UV1LF/irbf4c1dfa0791.tex"'
------------
Latexmk: applying rule 'pdflatex'...
This is pdfTeX, Version 3.14159265-2.6-1.40.18 (TeX Live 2017) (preloaded format=pdflatex)
restricted \write18 enabled.
entering extended mode
Latexmk: Found input bbl file 'irbf4c1dfa0791.bbl'
Latexmk: Log file says output to 'irbf4c1dfa0791.pdf'
=== TeX engine is 'pdfTeX'
Latexmk: All targets (irbf4c1dfa0791.pdf) are up-to-date
Latexmk: This is Latexmk, John Collins, 17 Jan. 2018, version: 4.55.
Latexmk: No file name specified, and I couldn't find any
Use
latexmk -help
to get usage information
Output created: irbf4c1dfa0791.pdf
Error in tools::file_path_as_absolute(output_file) :
file '/tmp/Rtmp1UV1LF/irbf4c1dfa0791.pdf' does not exist
Calls: issuesGenPDF -> <Anonymous> -> <Anonymous>
In addition: Warning messages:
1: In block_exec(params) : failed to tidy R code in chunk <setup>
reason: Error in loadNamespace(name) : there is no package called 'formatR'
2: In file.rename(file_with_ext(texfile, "pdf"), output_file) :
cannot rename file '/tmp/Rtmp1UV1LF/irbf4c1dfa0791.pdf' to '/tmp/Rtmp1UV1LF/irbf4c1dfa0791.pdf', reason 'No such file or directory'
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘test.R’
Running the tests in ‘tests/test.R’ failed.
Complete output:
> # Use the default data to avoid token requirement for testing purposes
> # Generate markdown text string
> library(issueReporter)
> setwd(tempdir())
>
> testMD <- issuesData2md()
>
> # Use default data to generate PDF
> issuesGenPDF(style = "tint",
+ RmdLocation = system.file("rmarkdown/templates/", "tint.Rmd",
+ package = "issueReporter"),
+ outputFile = tempfile(pattern="ir", fileext=".pdf"),
+ outputDir = tempdir(),
+ md = testMD,
+ setTitle = "Example Notes",
+ setAuthor = "Author Name")
processing file: tint.Rmd
inline R code fragments
label: setup (with options)
List of 1
$ include: logi FALSE
ordinary text without R code
label: unnamed-chunk-1 (with options)
List of 2
$ results: chr "asis"
$ echo : logi FALSE
ordinary text without R code
output file: tint.knit.md
/usr/local/bin/pandoc +RTS -K512m -RTS tint.utf8.md --to latex --from markdown+autolink_bare_uris+ascii_identifiers+tex_math_single_backslash --output /tmp/RtmpFKfLag/ir46782c75937d.tex --template /data/gannet/ripley/R/test-3.5/tint/rmarkdown/templates/pdf/resources/tintPdf-template.tex --highlight-style pygments --latex-engine pdflatex --natbib --variable 'documentclass:tufte-handout'
You are recommended to install the tinytex package to build PDF.FALSE
Latexmk: This is Latexmk, John Collins, 17 Jan. 2018, version: 4.55.
Rule 'pdflatex': File changes, etc:
Changed files, or newly in use since previous run(s):
'ir46782c75937d.aux'
------------
Run number 1 of rule 'pdflatex'
------------
------------
Running 'pdflatex -halt-on-error -interaction=batchmode -recorder "/tmp/RtmpFKfLag/ir46782c75937d.tex"'
------------
Latexmk: applying rule 'pdflatex'...
This is pdfTeX, Version 3.14159265-2.6-1.40.18 (TeX Live 2017) (preloaded format=pdflatex)
restricted \write18 enabled.
entering extended mode
Latexmk: Found input bbl file 'ir46782c75937d.bbl'
Latexmk: Log file says output to 'ir46782c75937d.pdf'
=== TeX engine is 'pdfTeX'
Latexmk: All targets (ir46782c75937d.pdf) are up-to-date
Latexmk: This is Latexmk, John Collins, 17 Jan. 2018, version: 4.55.
Latexmk: No file name specified, and I couldn't find any
Use
latexmk -help
to get usage information
Output created: ir46782c75937d.pdf
Error in tools::file_path_as_absolute(output_file) :
file '/tmp/RtmpFKfLag/ir46782c75937d.pdf' does not exist
Calls: issuesGenPDF -> <Anonymous> -> <Anonymous>
In addition: Warning messages:
1: In block_exec(params) : failed to tidy R code in chunk <setup>
reason: Error in loadNamespace(name) : there is no package called 'formatR'
2: In file.rename(file_with_ext(texfile, "pdf"), output_file) :
cannot rename file '/tmp/RtmpFKfLag/ir46782c75937d.pdf' to '/tmp/RtmpFKfLag/ir46782c75937d.pdf', reason 'No such file or directory'
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘test.R’ [2s/3s]
Running the tests in ‘tests/test.R’ failed.
Complete output:
> # Use the default data to avoid token requirement for testing purposes
> # Generate markdown text string
> library(issueReporter)
> setwd(tempdir())
>
> testMD <- issuesData2md()
>
> # Use default data to generate PDF
> issuesGenPDF(style = "tint",
+ RmdLocation = system.file("rmarkdown/templates/", "tint.Rmd",
+ package = "issueReporter"),
+ outputFile = tempfile(pattern="ir", fileext=".pdf"),
+ outputDir = tempdir(),
+ md = testMD,
+ setTitle = "Example Notes",
+ setAuthor = "Author Name")
processing file: tint.Rmd
inline R code fragments
label: setup (with options)
List of 1
$ include: logi FALSE
ordinary text without R code
label: unnamed-chunk-1 (with options)
List of 2
$ results: chr "asis"
$ echo : logi FALSE
ordinary text without R code
Error in file(con, "w") : cannot open the connection
Calls: issuesGenPDF -> <Anonymous> -> <Anonymous> -> writeLines -> file
In addition: Warning messages:
1: In block_exec(params) : failed to tidy R code in chunk <setup>
reason: Error in loadNamespace(name) : there is no package called 'formatR'
2: In file(con, "w") :
cannot open file 'tint.knit.md': Read-only file system
Execution halted
Flavors: r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘test.R’
Running the tests in ‘tests/test.R’ failed.
Complete output:
> # Use the default data to avoid token requirement for testing purposes
> # Generate markdown text string
> library(issueReporter)
> setwd(tempdir())
>
> testMD <- issuesData2md()
>
> # Use default data to generate PDF
> issuesGenPDF(style = "tint",
+ RmdLocation = system.file("rmarkdown/templates/", "tint.Rmd",
+ package = "issueReporter"),
+ outputFile = tempfile(pattern="ir", fileext=".pdf"),
+ outputDir = tempdir(),
+ md = testMD,
+ setTitle = "Example Notes",
+ setAuthor = "Author Name")
Error: pandoc version 1.12.3 or higher is required and was not found (see the help page ?rmarkdown::pandoc_available).
Execution halted
Flavor: r-patched-solaris-x86
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘test.R’ [1s/1s]
Running the tests in ‘tests/test.R’ failed.
Last 13 lines of output:
> setwd(tempdir())
>
> testMD <- issuesData2md()
>
> # Use default data to generate PDF
> issuesGenPDF(style = "tint",
+ RmdLocation = system.file("rmarkdown/templates/", "tint.Rmd",
+ package = "issueReporter"),
+ outputFile = tempfile(pattern="ir", fileext=".pdf"),
+ outputDir = tempdir(),
+ md = testMD,
+ setTitle = "Example Notes",
+ setAuthor = "Author Name")
Error: pandoc version 1.12.3 or higher is required and was not found (see the help page ?rmarkdown::pandoc_available).
Execution halted
Flavor: r-release-osx-x86_64
Version: 0.1.0
Check: tests
Result: ERROR
Running the tests in ‘tests/test.R’ failed.
Last 13 lines of output:
> testMD <- issuesData2md()
>
> # Use default data to generate PDF
> issuesGenPDF(style = "tint",
+ RmdLocation = system.file("rmarkdown/templates/", "tint.Rmd",
+ package = "issueReporter"),
+ outputFile = tempfile(pattern="ir", fileext=".pdf"),
+ outputDir = tempdir(),
+ md = testMD,
+ setTitle = "Example Notes",
+ setAuthor = "Author Name")
Error: pandoc version 1.12.3 or higher is required and was not found (see the help page ?rmarkdown::pandoc_available).
Execution halted
Flavor: r-oldrel-osx-x86_64