CRAN Package Check Results for Package HMMpa

Last updated on 2018-05-03 10:50:27 CEST.

Check Details

Version: 1.0
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Note: break used in wrong context: no loop is visible
    See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/HMMpa.Rcheck/00install.out’ for details.
    Information on the location(s) of code generating the ‘Note’s can be
    obtained by re-running with environment variable R_KEEP_PKG_SOURCE set
    to ‘yes’.
Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.0
Check: R code for possible problems
Result: NOTE
    Baum_Welch_algorithm : negterm3: no visible global function definition
     for ‘dpois’
    Baum_Welch_algorithm : negterm3: no visible global function definition
     for ‘dnorm’
    Baum_Welch_algorithm: no visible global function definition for ‘dpois’
    Baum_Welch_algorithm: no visible global function definition for ‘dgeom’
    Baum_Welch_algorithm: no visible global function definition for ‘dnorm’
    Baum_Welch_algorithm: no visible global function definition for ‘nlm’
    HMM_simulation: no visible global function definition for ‘rpois’
    HMM_simulation: no visible global function definition for ‘rnorm’
    HMM_simulation: no visible global function definition for ‘rgeom’
    HMM_simulation: no visible global function definition for ‘par’
    HMM_simulation: no visible global function definition for ‘plot’
    HMM_simulation: no visible global function definition for ‘abline’
    HMM_simulation: no visible global function definition for ‘lines’
    HMM_training: no visible global function definition for ‘sd’
    Viterbi_algorithm : function_discr_log_L_p_norm: no visible global
     function definition for ‘pnorm’
    Viterbi_algorithm: no visible binding for global variable ‘dpois’
    Viterbi_algorithm: no visible binding for global variable ‘dgeom’
    Viterbi_algorithm: no visible binding for global variable ‘dnorm’
    cut_off_point_method: no visible global function definition for ‘par’
    cut_off_point_method: no visible global function definition for ‘plot’
    cut_off_point_method: no visible global function definition for
     ‘abline’
    cut_off_point_method: no visible global function definition for
     ‘points’
    cut_off_point_method: no visible global function definition for
     ‘barplot’
    cut_off_point_method: no visible global function definition for
     ‘legend’
    direct_numerical_maximization: no visible global function definition
     for ‘nlm’
    forward_backward_algorithm : function_discr_log_L_p_norm: no visible
     global function definition for ‘pnorm’
    forward_backward_algorithm: no visible binding for global variable
     ‘dpois’
    forward_backward_algorithm: no visible binding for global variable
     ‘dgeom’
    forward_backward_algorithm: no visible binding for global variable
     ‘dnorm’
    forward_backward_algorithm: no visible global function definition for
     ‘dpois’
    initial_parameter_training: no visible global function definition for
     ‘quantile’
    initial_parameter_training: no visible global function definition for
     ‘sd’
    rgenpois: no visible global function definition for ‘runif’
    Undefined global functions or variables:
     abline barplot dgeom dnorm dpois legend lines nlm par plot pnorm
     points quantile rgeom rnorm rpois runif sd
    Consider adding
     importFrom("graphics", "abline", "barplot", "legend", "lines", "par",
     "plot", "points")
     importFrom("stats", "dgeom", "dnorm", "dpois", "nlm", "pnorm",
     "quantile", "rgeom", "rnorm", "rpois", "runif", "sd")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.0
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Note: break used in wrong context: no loop is visible
    See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/HMMpa.Rcheck/00install.out’ for details.
    Information on the location(s) of code generating the ‘Note’s can be
    obtained by re-running with environment variable R_KEEP_PKG_SOURCE set
    to ‘yes’.
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.0
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Note: break used in wrong context: no loop is visible
    See ‘/data/gannet/ripley/R/packages/tests-clang/HMMpa.Rcheck/00install.out’ for details.
    Information on the location(s) of code generating the ‘Note’s can be
    obtained by re-running with environment variable R_KEEP_PKG_SOURCE set
    to ‘yes’.
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.0
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Note: break used in wrong context: no loop is visible
    See ‘/data/gannet/ripley/R/packages/tests-devel/HMMpa.Rcheck/00install.out’ for details.
    Information on the location(s) of code generating the ‘Note’s can be
    obtained by re-running with environment variable R_KEEP_PKG_SOURCE set
    to ‘yes’.
Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.0
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Note: break used in wrong context: no loop is visible
    See 'd:/Rcompile/CRANpkg/local/3.5/HMMpa.Rcheck/00install.out' for details.
    Information on the location(s) of code generating the 'Note's can be
    obtained by re-running with environment variable R_KEEP_PKG_SOURCE set
    to 'yes'.
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64

Version: 1.0
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Note: break used in wrong context: no loop is visible
    See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/HMMpa.Rcheck/00install.out’ for details.
    Information on the location(s) of code generating the ‘Note’s can be
    obtained by re-running with environment variable R_KEEP_PKG_SOURCE set
    to ‘yes’.
Flavor: r-patched-linux-x86_64

Version: 1.0
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Note: break used in wrong context: no loop is visible
    See ‘/home/ripley/R/packages/tests32/HMMpa.Rcheck/00install.out’ for details.
    Information on the location(s) of code generating the ‘Note’s can be
    obtained by re-running with environment variable R_KEEP_PKG_SOURCE set
    to ‘yes’.
Flavor: r-patched-solaris-x86

Version: 1.0
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Note: break used in wrong context: no loop is visible
    See ‘/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/HMMpa.Rcheck/00install.out’ for details.
    Information on the location(s) of code generating the ‘Note’s can be
    obtained by re-running with environment variable R_KEEP_PKG_SOURCE set
    to ‘yes’.
Flavor: r-release-linux-x86_64

Version: 1.0
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Note: break used in wrong context: no loop is visible
    See ‘/Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/results/3.5/HMMpa.Rcheck/00install.out’ for details.
    Information on the location(s) of code generating the ‘Note’s can be
    obtained by re-running with environment variable R_KEEP_PKG_SOURCE set
    to ‘yes’.
Flavor: r-release-osx-x86_64